| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2534 |
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| Symbol | |
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| ID | 5695385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3066913 |
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| End bp | 3069327 |
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| Gene Length | 2415 bp |
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| Protein Length | 804 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641265143 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_001530415 |
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| Protein GI | 158522545 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.401637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGGTG GAAAAATGGC AAATATCCTC AAAAAGGCAA TAAAAGCCCT CGCCCTGCTG
ATGGTGATCG GCATGGTCAT CGCCGTGGTA GCGGGGGGCG TGTTCTATTA CCAGATCAGC
CGGGATCTGC CCCGGATATT TACTATTGAT GACTACCGCC CGCCGACGGT CACCACCCTC
TATTCCGCTG AAAAGCAAAA GATCGCCGAA TTTTACACAG AGCGGCGTAT CGTGGTGCCC
TTAGACCGCA TGCCGCCCAT GCTGATCAAC GCCTTTGTGG CGGCGGAGGA TGCCCGGTTT
TTTCAGCATA CCGGCGTGGA CCTGACCGGT GTGGCCCGGG CATTCATGAA AAACCTGGAG
GCCGGTGCCA TTGTTCAGGG CGGCAGCACC ATCACCCAGC AGGTGGCCAA GTCCTTTTTT
CTGTCGTCCG AGCGGACCTA CACGCGAAAG ATCAGGGAGG CGATCCTTTC TTATCGAATT
GAGAAGCGGT TCTCCAAGGC AGATATTCTC TATCTTTACT TAAACCAGAT ATACCTTGGC
CATGGCGCTT ATGGCGTGGC CGCGGCCGCG GAAAACTATT TCGGCAAGCC CGTGGAAGAA
CTCTCCCTGG CCGAATGCAC GCTGATTGCC GGGCTTCCCC AGGCCCCCAG CCGCTACTCG
CCGTACCGGT ACCCGGCCCG GGCCAAGAAC CGGCAACTCT ATGTGTTAAA CCAGATGGTC
ACCGGGGGGT ATATCTCCGA GGCAGAGGCC CAGGCAGCCC GGGAGGCGGA ACTGGAAATC
CAGCCGGTGC GGAGCCTGTT CCAGGAGAAT GCCCCGTGGT ATGCCGAGCA TGTCCGCCGG
TACGTGGAAG CCAAATACGG GCGGGACACG CTTTACAACC AGGGGCTCTC GGTGTACACA
GCCGTGGATC TTTCCATGCA GGAGGCGGCC CGGCGCGAGG TGGACAGGGG ATTGCGGGAC
CTGGACAAAC GGCAGGGGTA CCGCGGCCCT ATTCGTCGTA TTTCCGAAGA AGAGATCGAG
CCTTTTCTGT CCTCCCTGCG GGAGGAGGCC CTCGGGAAGA TGGAGCTGGC CGTCGTGGGA
GACATTGTCC AGGGCGTGGT GGTGGATGTG GACGATGAAA AAGAGAGCGC GTGGGTGCGC
CTGGCCCACG GCGCCGGAGA GATCCCCCTT GAGGAGATGA AGTGGGCCCG CCGGCCCGAC
CCAGGGGTGG CATGGTACCA GTCGGCCGCT ACGATCAAAA AACCTTCCCA GGCTTTGAAA
ACAGGGGATG TGATATGGGT GAGAATTGTC AGCCTTGCGG AATCGCCTGA GAATATGGCC
CCGGCGGCTG AGGACCGGGC GCTGGGTACC GCTGTTTTAC GGCTCTCCCT GGAACAGGAG
CCGGCGGTGG AAGCGGCCCT GATCTGTATG GAGGCCAGGC CCGGCCTTGT GCGGGCCATG
ATCGGGGGCC GGGACGCGGC AAAAAGCCAG TTCAACCGGG CCGTCCAGGC CATACGGCAG
CCGGGATCGG CCTTCAAGCC CATTATTTAC GCGGCGGCCC TGGACAAGGG GTATACACCG
GCCAGCGTGA TCATCGACTC GGCCATCGTG TTTGAAGACA CGGCCCGCAA TTTCACATGG
AAACCCCAGA ACTATGAAGA ACGGTTTTTC GGCCCCACCC TGTTCCGCCG GGCACTGGAA
AAGTCCCACA ATATTCCCAC CATCAAAATT CTGATGGATA TCGGGGTGGA TTATATTCAT
GACTACGCGA AAAAACTGGG CATTACTTCC CCTTTGAGCC GGGATCTTTC CATCGCCCTG
GGGTCATCGG GCCTTGCGCC GGTTGAACTG GCAAAGGCTT ATGCCGTGTT TGCCAATATG
GGCGACCGGG TTGAACCGGT GTTTATTACC CGGATAGAGG ACAGGGAGGG CCGGGTGCTG
GAGGAAAATC GAGCCGAGCC GGTCCATGTT ATCGGCAGCG ACACCGCTTA TATCATGACC
CACCTGCTCG AGGGGGTGGT GGAACACGGC ACCGGACGCC GGGCCAGGGA GCTGAACCGG
CCGGCCGCGG GCAAAACCGG CACCACCGAC AACCTGAACG ACGCCTGGTT TGTGGGGTAC
ACCCCTGATT TCGTGACCGT GGTGTGGGTG GGTTTTGACG AGGAGCAGTC CCTGGGCAAG
GGAGAGACCG GGGCCAGCGC GGCCAGCCCC ATCTGGCTGG GGTTCATGCA GACCATACTG
GCCGGCAAAC CGGTGAAGGA GTTCGAGGTG CCCGAGGGCG TGGTGTTTTC CCGCATTGAC
GCCGAAACCG GGCTGCTGGC AACCGATGAC TCCCGGGAAA CCTTTTTTGA GTGTTTCAAG
AAGGGCACCG AACCCACCGA GTATGCCGAA CCCGCCGATA CGGTGGATGA GGAGGGTTTT
TTCAAGGGCA TGTAA
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| Protein sequence | MTGGKMANIL KKAIKALALL MVIGMVIAVV AGGVFYYQIS RDLPRIFTID DYRPPTVTTL
YSAEKQKIAE FYTERRIVVP LDRMPPMLIN AFVAAEDARF FQHTGVDLTG VARAFMKNLE
AGAIVQGGST ITQQVAKSFF LSSERTYTRK IREAILSYRI EKRFSKADIL YLYLNQIYLG
HGAYGVAAAA ENYFGKPVEE LSLAECTLIA GLPQAPSRYS PYRYPARAKN RQLYVLNQMV
TGGYISEAEA QAAREAELEI QPVRSLFQEN APWYAEHVRR YVEAKYGRDT LYNQGLSVYT
AVDLSMQEAA RREVDRGLRD LDKRQGYRGP IRRISEEEIE PFLSSLREEA LGKMELAVVG
DIVQGVVVDV DDEKESAWVR LAHGAGEIPL EEMKWARRPD PGVAWYQSAA TIKKPSQALK
TGDVIWVRIV SLAESPENMA PAAEDRALGT AVLRLSLEQE PAVEAALICM EARPGLVRAM
IGGRDAAKSQ FNRAVQAIRQ PGSAFKPIIY AAALDKGYTP ASVIIDSAIV FEDTARNFTW
KPQNYEERFF GPTLFRRALE KSHNIPTIKI LMDIGVDYIH DYAKKLGITS PLSRDLSIAL
GSSGLAPVEL AKAYAVFANM GDRVEPVFIT RIEDREGRVL EENRAEPVHV IGSDTAYIMT
HLLEGVVEHG TGRRARELNR PAAGKTGTTD NLNDAWFVGY TPDFVTVVWV GFDEEQSLGK
GETGASAASP IWLGFMQTIL AGKPVKEFEV PEGVVFSRID AETGLLATDD SRETFFECFK
KGTEPTEYAE PADTVDEEGF FKGM
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