Gene Dole_2488 details

Gene Information

• Locus tag: Dole_2488
• ID: 5695338
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: -
• Start bp: 3016698
• End bp: 3017249
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 641265096
• Product: 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase
• Protein accession: YP_001530369
• Protein GI: 158522499
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
• TIGRFAM ID: [TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGAGG CATGCGCGGC CCTGAAGACG GTTGGAACCG GCAAGACCCC AGCCGTGGCC 
CATGTGGTTT ACATCTCCAT GGGGTCCAAC CTGGGCAGCC GGTCCGCCAA CTGTGCCATG 
GCCGTGGACC TGCTGGATGC CACCGACGGC ATTCGGGTGA CCGGCCGGTC AAAGCTTTTT 
TCCACCGAGC CGGTGGACTA CACTGACCAG CAGTGGTTTG TCAACGGCAT GGTCCGGGTG 
GAGACCCTGC TCTCCCCGCC GGAATTGCTG GCCCGGCTCA AGGAGATCGA GCGGCTGGTG 
GGCCGGACCG CGTCGACCAT ACGGTTCGGC CCCCGGGTCC TGGACCTGGA TATCGTGCTG 
TTTGACGACA TGGTGATGGC GGCCGAGAAC CTGGTGATTC CCCATCCCAG AATGCACCGG 
CGGCGGTTTG TTTTGGCTCC GTTTTGTGAT ATAGACCCGG AAGTTGTTCA CCCGGTCCTC 
AAAAAGAGCA TGCGGGAACT GTATGACGGC CTGGGCCCGG ATGGACAGGC CGTGCTGGAG 
TATGCCCAAT GA 

 

Protein sequence

MNEACAALKT VGTGKTPAVA HVVYISMGSN LGSRSANCAM AVDLLDATDG IRVTGRSKLF 
STEPVDYTDQ QWFVNGMVRV ETLLSPPELL ARLKEIERLV GRTASTIRFG PRVLDLDIVL 
FDDMVMAAEN LVIPHPRMHR RRFVLAPFCD IDPEVVHPVL KKSMRELYDG LGPDGQAVLE 
YAQ