| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2483 |
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| Symbol | |
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| ID | 5695333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3011330 |
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| End bp | 3013909 |
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| Gene Length | 2580 bp |
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| Protein Length | 859 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641265091 |
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| Product | preprotein translocase, SecA subunit |
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| Protein accession | YP_001530364 |
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| Protein GI | 158522494 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTTCT GGGAGACAGC CGAAAAGCTT TCAGAAAAGG TGTTTGGCGG TGTCAGCAAT
ATGCTGCTCT CCGTGTTCGG CAGTCAGAAC GAACGGGTGC TCAAGCGGCT CTATCCGGTG
GTGGATCAGA TCAACGCCCT GGAAGAGACC ATGAAGGCCA AGAGCGACGA AGCGCTGAAA
CAGCAGACCG CTGTTTTCAA ACAGCGGTTT CAGGAAGGCG AGTCCCTGGA TGACCTGTTG
CCCGAGGCTT TTGCCACGGT GCGGGAAGCG TCCGTGCGGT CCCTGGGCAT GCGCCATTTT
GACGTGCAGC TGATCGGCGG TATGGTGCTG CACCAGGGCA AGATCGCGGA GATGAAAACC
GGTGAAGGCA AGACCCTGGC GGCCACGCTT CCCGTGTACC TGAACGCTCT CACCGGCCGT
GGGGTTCACG TGGTCACGGT GAACGACTAC CTGGCATCCC GGGACGCCCA GTGGATGGGA
ACCATTTACA CGTTTCTCGG CCTGTCGGTG GGCGTGATTG TTCACGGCAT GGACGACGCG
GAACGCAAGG CGGCCTACGG GGCCGACATT ACCTACGGCA CCAACAACGA GTTCGGCTTC
GACTACCTGC GGGACAACAT GAAGTTCTAC AGCGATTCGC TGGTGCAGCG GGACCTTCAT
TACGCCATCG TGGACGAGGT GGACAGTATT CTCATCGACG AGGCCCGGAC CCCGCTGATC
ATTTCCGGCC CGGCGGAAAA GTCCACCACC CTTTACTACC AGGCCAATAC CGTTATTCCC
GCCCTCAAGG AAGAAGACGA TTATACAATT GATGAAAAGG CCCGGTCCGT GACCCTGACC
GAGGCCGGCG TGGCAAAAGC GGAAAAGGCC ATGGGTGTGG ACAACCTTTA CGCGCCGGAA
AATGTTGAAA GCCTTCATCA CGTAAACCAG GCCTTAAAGG CCCACACGCT GTTCAAGCGG
GACGTGGATT ACATTATCAC CGACGAAAAA GAGGTGGTGA TTGTTGATGA GTTCACCGGC
CGCCTGATGC CGGGTCGCCG GTTCAGCGAG GGGCTTCACC AGGCACTGGA GGCCAAAGAG
GGGGTTCGCA TCGAAAACGA GAACCAGACC CTGGCCACCA TCACTTTTCA GAACTACTTC
CGCATGTACG ACAAGCTGGC CGGCATGACC GGCACGGCCG ACACCGAGGC CGAGGAGTTT
GCCAAGATCT ACAGGCTGAG CGTGGTGGTG ATTCCCACCA ACATGCCCAT GGTGCGAACC
GATTTTGCGG ATGTAATTTA CAAGACCCGG GCGGAAAAAT TCGAGGCGGT GTTAGACGAG
ATCGCCGCCC TTCATGAAAA GGGCCAGCCC GTTCTGGTGG GCACGGTTTC GATTGACGTG
TCCGAACTGC TCAGCAAGAA ACTTCAGAAG CGGGGCATTC GCCATTCGGT GCTCAACGCC
AAGCGGCACC GGCAGGAGGC CGAGATCGTG GCCGCCGCCG GACAGAAGGG GGCCGTGACC
ATTTCCACCA ACATGGCCGG CCGCGGCACT GACATCGTGC TGGGCGAAGG GGTCCGGGAA
CTGGACGGAC TCCACATCCT GGGCACGGAA CGCCACGAGA GCCGGCGCAT CGACAACCAG
TTGCGGGGCC GTTCCGGCCG GCAGGGGGAT CCGGGCAGCT CCCGCTTCTA TCTTTCCCTG
GAAGACGACC TGCTGCGGAT TTTCGGCGGG GACCGGATGA AGCGGATCAT GGAGACCCTG
GGCATGAAGG ACGGGGACCC CATTGAGCAC GGCATGATCA CCCGGGCCAT TGAAAACGCC
CAGAAGAAGG TGGAGGGCCA CAATTTTGAA ATCCGCAAGC ACCTGATCGA GTACGACGAC
GTGATGAACG AACAACGGAC CGTGATCTAC GAACAGCGCC GCAGGGCCCT TCGCAAGGAG
GATCTCAAGG AGCCTGTTCT GGACATGATC GCGGACAAGG CCGACGAGAT CGCGGCCCGG
TACGCCGATA AAAACGCCCT GCCCGACGAG TGGGACCTGG ACGGCCTCAA CGAGGCCCTG
TACAAGCAGT TCAACATGCG CCTGGCCTTT GACGAGGCGT CACTGGAGGG GCTGGATGCC
GAGGCCCTGG CCTCCCGTGT TTATGAGTCG GCGGTCCGGC ATTATGAGAA CAAGGAAAAA
GCCATCGGCG CCCCGGACAT GCGGGAACTG GAGCGGATTT TTCTGCTGCA GACCGTGGAC
GCCCTGTGGA AGGACCACCT GCTCTCCATG GACCATCTGA AGGAGGGCAT CGGGCTGAGG
GGGTACGCCC AGCAGAATCC GCTGATCATT TATAAAAAAG AGGCCTTCTC CATGTTTCAG
GAGATGATCG AACGGATCAA AGAGGAGACC CTTTCCATTC TGTTCCGCAT TCAGATTCAA
ACACCGGATA CCGTGGAAAA GCTGATGCAG CCCGAGGAGC AGGATTTTAC CCTTTCCCGG
GGCGGTGATG AAGATGAACG AAAAAAGGCG CCGGTCAAGC GGGACGATGA CAAGATCGGC
AGAAATTCGC CGTGTCCCTG CGGCAGCGGC AAGAAGTACA AGAAGTGCTG CGGCGCCTGA
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| Protein sequence | MQFWETAEKL SEKVFGGVSN MLLSVFGSQN ERVLKRLYPV VDQINALEET MKAKSDEALK
QQTAVFKQRF QEGESLDDLL PEAFATVREA SVRSLGMRHF DVQLIGGMVL HQGKIAEMKT
GEGKTLAATL PVYLNALTGR GVHVVTVNDY LASRDAQWMG TIYTFLGLSV GVIVHGMDDA
ERKAAYGADI TYGTNNEFGF DYLRDNMKFY SDSLVQRDLH YAIVDEVDSI LIDEARTPLI
ISGPAEKSTT LYYQANTVIP ALKEEDDYTI DEKARSVTLT EAGVAKAEKA MGVDNLYAPE
NVESLHHVNQ ALKAHTLFKR DVDYIITDEK EVVIVDEFTG RLMPGRRFSE GLHQALEAKE
GVRIENENQT LATITFQNYF RMYDKLAGMT GTADTEAEEF AKIYRLSVVV IPTNMPMVRT
DFADVIYKTR AEKFEAVLDE IAALHEKGQP VLVGTVSIDV SELLSKKLQK RGIRHSVLNA
KRHRQEAEIV AAAGQKGAVT ISTNMAGRGT DIVLGEGVRE LDGLHILGTE RHESRRIDNQ
LRGRSGRQGD PGSSRFYLSL EDDLLRIFGG DRMKRIMETL GMKDGDPIEH GMITRAIENA
QKKVEGHNFE IRKHLIEYDD VMNEQRTVIY EQRRRALRKE DLKEPVLDMI ADKADEIAAR
YADKNALPDE WDLDGLNEAL YKQFNMRLAF DEASLEGLDA EALASRVYES AVRHYENKEK
AIGAPDMREL ERIFLLQTVD ALWKDHLLSM DHLKEGIGLR GYAQQNPLII YKKEAFSMFQ
EMIERIKEET LSILFRIQIQ TPDTVEKLMQ PEEQDFTLSR GGDEDERKKA PVKRDDDKIG
RNSPCPCGSG KKYKKCCGA
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