Gene Dole_2453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2453 
Symbol 
ID5695302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2966725 
End bp2968092 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content58% 
IMG OID641265060 
Productcarboxyl-terminal protease 
Protein accessionYP_001530334 
Protein GI158522464 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0793] Periplasmic protease 
TIGRFAM ID[TIGR00225] C-terminal peptidase (prc) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000493491 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAACA GAAAGTCCCG ATGGATAAAA ATTCTTGGCG TCACATCAAC CCTGGCCTGC 
CTGCTGATCA TCGGCGCCGG GTTTTCCTGC ACCATCTCCG CCGGCAGCGA TGAAACCTAT
AAAAGCCTGA AGATATTCTC CTCGGTCATC GAGACCCTTG AAAAAGAGTA TGTGGATCCC
GTGGATACAA CAGAACTGAT CGAAGCGGCC ATTCAGGGCA TGGTCAAGAG CCTGGACCCC
CACTCCGAAT ACCTGCCTTC CGACGCCTTC AAGGATTTCC AATCCGACAC CAGGGGGGAG
TTTGAAGGCA TCGGTATCGT GATCACCATG CCCAAGGGCG TACTTACCGT GATTTCGCCC
ATCGAGGGGA CCCCTGCCTT TAAATCCGGT ATTCAGCCCG GCGACATCAT CACCACCATT
GACGATGAGC CCACCGCGGA CATGGAGCTG TGGGAAGCGG TCAAAAGAAT GCGGGGGGAA
AAAGGGACAT CGGTCACCAT CACCATTCGC CGGGAAGGGG TGGCCGAAGC GCTCTCCTTT
GACCTGGTGC GGGCCGTGAT TCCCATTGTC AGCGTCAAGC ACGCCATGCT CAAGCCGGGA
TACGGCTATG TCTGGGTCAC CAACTTCCAG GCCAACACCA CCGATGAACT GAAAACCGCC
CTGGCCGGGC TGGAGGCCGA CAATGGCGGC GACCTGAAGG GCCTGATCCT CGACCTGCGG
AACAATCCCG GAGGCCTGCT GGACCAGGCC GTGGCCATCT CGGACATGTT TCTGGATGAA
GGCACCATTC TCTCGGTCAA GGAGCGGGAA AAAGAGAGCA ATTACAACGC CCGTCCGGAC
AAGACCCGGC ACGACTATCC CCTGGTGCTG CTGATCAACG GCGGCAGCGC CAGTGCTTCT
GAAATCGTGG CCGGGGCGTT GCAGGACCAT AAACGGGCAC TGGTGATCGG CACCACCTCC
TTTGGCAAGG GGTCGGTACA GACGGTGCAG CCCTTAAGCG ACGGATCGGG AATCAAGTTC
ACCATCGCCC GCTACTACAC GCCCAGCGGC ACCTCCATTC AGACCAAAGG CATTGTGCCG
GACATTGAGG TAAAGCCCGG GCTTCTGGAT TCAGCCGACG AAAAAGAGGT GCCCCGGCTC
AAGGAAAAAG ACCTGAAAAA CCACCTGGAA GCGGCGCCCA TGAAAGACGC CCCCGCCGAT
GACAAAACGC AGGCGCCGGC AGCCGACGAC AAGAAGACAA GGGAAGACCT GACCAACACC
CGTTACGGCG ACCTGGACCC GGACCTGATG CTGCGGGATG CCCAGATCGT CCGGGCACTG
GATGCCCTGA TCTCCTATGA AATCTTCAGC GCCCGGCACG CGAAATAA
 
Protein sequence
MNNRKSRWIK ILGVTSTLAC LLIIGAGFSC TISAGSDETY KSLKIFSSVI ETLEKEYVDP 
VDTTELIEAA IQGMVKSLDP HSEYLPSDAF KDFQSDTRGE FEGIGIVITM PKGVLTVISP
IEGTPAFKSG IQPGDIITTI DDEPTADMEL WEAVKRMRGE KGTSVTITIR REGVAEALSF
DLVRAVIPIV SVKHAMLKPG YGYVWVTNFQ ANTTDELKTA LAGLEADNGG DLKGLILDLR
NNPGGLLDQA VAISDMFLDE GTILSVKERE KESNYNARPD KTRHDYPLVL LINGGSASAS
EIVAGALQDH KRALVIGTTS FGKGSVQTVQ PLSDGSGIKF TIARYYTPSG TSIQTKGIVP
DIEVKPGLLD SADEKEVPRL KEKDLKNHLE AAPMKDAPAD DKTQAPAADD KKTREDLTNT
RYGDLDPDLM LRDAQIVRAL DALISYEIFS ARHAK