Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2401 |
Symbol | |
ID | 5695249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 2892349 |
End bp | 2893698 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641265007 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_001530282 |
Protein GI | 158522412 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATCGC ACATTGTCGT TGTTGACGAC GAACCCATCA CGCTCAAGCA GTTGCGGCGG ATTCTTGAAA AAGAGGGCCA CCGGGTGTCG GCCTTTTCCA ATCCCCGTCG GGCACTGGAT CATATCGAGA GCAATTCCTG CGATGTGCTG ATCAGCGACG TACGCATGCC CGCCATGGAC GGTATGGAGC TGATGACCCG GGTCAAGGCC CGGTTCCCGG ATATCGAGGT GATCCTGATC ACCGGGTACG CCTCCCTGGA CGGCGCCGTG GAGGCGGTTC GGGAGGGGGC GTTTCATTAC CTGGAAAAGC CCTTTACCCC GGACCGGGTA AGGGAGCGGG TGGGCCAGGC CCTGCACCTG CTTTCCGCCC GCCGGTCCGC CCGGCCAGGG GCCCAGGGGG AGGACCGGAA CGACGCCGGC CCCGTTATTA TCGGCCAGGG GGCCCGGATT CGGGAGGTGG TTTCCATCAT CGGCCAGATC GGGCCCACCG AATGCAATGT GCTCATCACC GGCGACTCGG GCAGCGGCAA GGAGCTGGTG GCCCGGGCCA TTCACGCGGC CAGCCGCCGG TCTGCCGGAC CTTTTCTGGC CTTTAACTGC GGCGCCTTGA GTGAAACCCT CATCGACAAC GAGCTGTTCG GCCACGAGAA GGGGGCCTTT ACCGGCGCGG AGAGCAGGGG CATCGGCCTG GTGGAGGCGG CCTCCGGCGG CACCCTTTTC CTTGACGAGA TCGGGGAGAT GCCCACCGCC ATGCAGGTGA AGCTGCTGCG GGTGCTTCAG GAAGGAGAGC TGATGCGGGT GGGCGGCAGC CGGCCCGTTC CCGTGGACGT GCGTATCGTG TCCGCCACGG CCGCGGACAT CAAGGCCGCG GTGGGTGAAG GCATCTTTCG CAAGGATCTC TATTTCCGGA TCAACGTGGT CAACATCAAG CTGCCCGGCC TGGCCGAGCG CAGGGAGGAC ATTCCCCTGC TGGCTTACCA CATTCTCAGC CGCCTTAACC GGCAGGGCGG GAAAAACATT CAGGCCATAT CCGAAAAAGC CATGGCCCTG CTGTCCGGCT ACGCCTTTCC CGGAAACGTG CGGGAGCTGG AAAATATTCT GGAGCGGGCC GTGGCGATCT GCCAGGGGGA GATAATCCGC GAGTGCGATC TGCCCCCGGA CCTGGTGGCC CTGGAACTTC AGGCTTACAG ACCGCCGGAC GAAACCTTCA TGACCCTGGC CGAACTGGAG CGGGACTATA TGGCCCACCT GTTGAAGATC ACCGGCGGAG CACGGTCCCG TACCGCGGAA ATTCTGGGTA TTGACCGGGC GTCGCTGTGG AGGAAGATGA AAAAATACGA CCTTGAGTAG
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Protein sequence | MISHIVVVDD EPITLKQLRR ILEKEGHRVS AFSNPRRALD HIESNSCDVL ISDVRMPAMD GMELMTRVKA RFPDIEVILI TGYASLDGAV EAVREGAFHY LEKPFTPDRV RERVGQALHL LSARRSARPG AQGEDRNDAG PVIIGQGARI REVVSIIGQI GPTECNVLIT GDSGSGKELV ARAIHAASRR SAGPFLAFNC GALSETLIDN ELFGHEKGAF TGAESRGIGL VEAASGGTLF LDEIGEMPTA MQVKLLRVLQ EGELMRVGGS RPVPVDVRIV SATAADIKAA VGEGIFRKDL YFRINVVNIK LPGLAERRED IPLLAYHILS RLNRQGGKNI QAISEKAMAL LSGYAFPGNV RELENILERA VAICQGEIIR ECDLPPDLVA LELQAYRPPD ETFMTLAELE RDYMAHLLKI TGGARSRTAE ILGIDRASLW RKMKKYDLE
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