| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2376 |
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| Symbol | |
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| ID | 5695224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2861743 |
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| End bp | 2863743 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641264982 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_001530257 |
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| Protein GI | 158522387 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.299298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATGATC TGACCACTTC ATTCACCCCG GCCGGGGATC AGCCCCGGGC CATTCGCAGG
CTCTGCGACC AGATCCGTTC CGGCCGTCGC CACAACGTGT TCGTGGGCGT CACCGGGTCG
GGCAAGACCT TTACCATGGC CCACGTGATC GCCGAGCTGA AACGGCCGGC CCTGATCATC
GCGCCCAACA AGACACTGGC GGCCCAGCTC TACAATGAAT TCCATGCCCT TTTTCCGCGC
AACGCAGTGG AATATTTTGT CAGCTACTAC GATTTTTATC AGCCAGAGGC CTACCTGCCG
GTGACCGACA CCTATATTCA GAAGGATTCG TCGATCAACG ACACCATTGA CAAGATGCGC
CACTCCGCCA CCCGGTCGGT GCTTTCCCGG CCTGACGTGA TCGTGGTGGC CAGCGTGTCC
TGCATCTTCG GTCTGGGGTC CCCGGAAGAC TACCGGGGCC TGCGCGTGGA ACTGGCGCCG
GGCATGGAAC TGGACCGGGA CCGGCTCCTG GCCGACCTGG TGGCGATTCA GTACGAGCGC
AACGACTACG ATTTTTCCAG GGGCGTGTTC CGGGTGCGGG GCGACCGGGT GGACATTTTC
CCCGCGTCCG AGGAGGAGGC GGCCCTGCGG GTGGAGTTTT TCGGCGACGA GGTGGAGGCC
CTGTTTGAAA TTGACCCGCT CAAGGGCAGC GTGCGGGGTA AAATTCCAAG GGCCGTCATC
TACCCGGCCA CCCACTACGT AACCCGGCAG CAGGACCGCA AGGCCATCGT GGACCGGGTA
AACGAGGAAC TCAAGGTCCG GATCGATCAC TTTCGCGCTG CCGGCAAGCT GATAGAGGCC
CAGCGCATCG AGGAGCGGAC CCGGTTTGAC CTGGAGATGA TCCTGGAGAT GGGATACTGC
AACGGCATTG AAAACTACTC CCGCCACCTG ACCGGCCGGG AGCCGGGCCA GCCCCCGGCC
ACCCTGCTGG ACTATTTCCC CGACGATTTT CTGCTGTTCC TGGACGAGTG CCATATCACC
GTGCCCCAGC TGGGGGCCAT GTATAAGGGG GACCACTCAC GCAAGTCCAC GCTGGTGGAG
TTCGGGTTCC GGCTGCCGTC GGCCTTGGAC AACCGGCCCC TGACCTTTGA GGAGTTTGAG
GAAAAGACAG GGCGGGCCGC GGTGATCTAT GTGTCGGCCA CGCCGGCTGC CTATGAGTAC
CGCAAGGCGG GCGATGCCGT GGCGGAGCAG ATCGTGCGGC CCACCGGCCT GGTGGATCCC
CGGATTGAGG TGCGAAGCGC GGAAAACCAG GTGGATCACC TGTTTGACGA GATTCGGGCT
CGGGTGGAGA AAAACGAGCG GGTCCTGATC ACCACCCTGA CCAAGCGCAT GGCCGAAGAC
CTGACCGACT ACTACGCCGA GCTGGGGGTC AAGACCCGGT ACCTTCATTC CGAGGTAAAG
ACGCTGGAGC GCATGGCCGT GATCTCCGAA CTGCGGCGGG GCGACGTGGA TGTGCTGATC
GGCATCAACC TGTTGCGGGA GGGGCTGGAT ATCCCCGAGG TCTCCCTGGT GGCCGTGCTG
GACGCCGACA AGGAGGGGTT TCTCCGGTCC GAACGATCCC TGATTCAGAT TTTCGGCCGG
GCCGCCCGGA ACGTCAACGG CACGGTGATT CTCTACGCGG ACCGCATCAC CGATGCCATG
GCCCGGGCCA TGGATGAGAC CAACCGTCGG CGGAAGATTC AGGCCACCTA TAACACGGAC
CACCACATCA CGCCCCGGAC GATTTTCAAG GAGATGTCCC CGGATTTCGG GGCACAGGGC
GGTGACAGGG CAGGGCCTTC CGCAGCCGTG GCCGAAACCC TTGCCCGGTA CGGTGACACG
GACGACCTGG ACGAGATTAT CCGGCGCCTG GAAAAGGAGA TGAAGGCCGC TGCCGATGAT
TATGAATTTG AAAAGGCCGC CGATATCCGG GACCGGATCG CGGCGTTAAG GAAGCTGATT
GTTTTTGACG GGAATGGATA G
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| Protein sequence | MYDLTTSFTP AGDQPRAIRR LCDQIRSGRR HNVFVGVTGS GKTFTMAHVI AELKRPALII
APNKTLAAQL YNEFHALFPR NAVEYFVSYY DFYQPEAYLP VTDTYIQKDS SINDTIDKMR
HSATRSVLSR PDVIVVASVS CIFGLGSPED YRGLRVELAP GMELDRDRLL ADLVAIQYER
NDYDFSRGVF RVRGDRVDIF PASEEEAALR VEFFGDEVEA LFEIDPLKGS VRGKIPRAVI
YPATHYVTRQ QDRKAIVDRV NEELKVRIDH FRAAGKLIEA QRIEERTRFD LEMILEMGYC
NGIENYSRHL TGREPGQPPA TLLDYFPDDF LLFLDECHIT VPQLGAMYKG DHSRKSTLVE
FGFRLPSALD NRPLTFEEFE EKTGRAAVIY VSATPAAYEY RKAGDAVAEQ IVRPTGLVDP
RIEVRSAENQ VDHLFDEIRA RVEKNERVLI TTLTKRMAED LTDYYAELGV KTRYLHSEVK
TLERMAVISE LRRGDVDVLI GINLLREGLD IPEVSLVAVL DADKEGFLRS ERSLIQIFGR
AARNVNGTVI LYADRITDAM ARAMDETNRR RKIQATYNTD HHITPRTIFK EMSPDFGAQG
GDRAGPSAAV AETLARYGDT DDLDEIIRRL EKEMKAAADD YEFEKAADIR DRIAALRKLI
VFDGNG
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