Gene Dole_2243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2243 
Symbol 
ID5695091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2716853 
End bp2717995 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content61% 
IMG OID641264849 
Productaminotransferase class V 
Protein accessionYP_001530124 
Protein GI158522254 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID[TIGR03402] cysteine desulfurase NifS 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGAC CCATTTATCT TGATTACAAC GGCACCACGC CCCTTGATCC GGAAGTGCTT 
GAGGCCATGC GGCCCTTCTG GGAAACGGAA TTCGGCAACC CGTCCAGTGC CCACTGGTAC
GGTATTCGGC CCAGGCAGGC CGTGGAAGCG GCCCGGCGCC AGGTGGCGGG TTTGCTCGGC
TGCCTTGCCG AAGAGGTCCT TTTCACCTCC GGCGGTACGG AATCCAACAA CCACGCCATA
CTGGGCATGG CCCGGGCCCT GAGGCATAAG GGCCGCCACA TTGTCACCAG CACCATTGAG
CACCCGGCGG TGCTGGAGGT GTGCCAATAC CTGGAAAAAG AAGGCTTTGA AACCACGCGA
GTTGCGGTGA ATGAGTTGGG CATGGTGGAC CCGGCAGCCG CGGAACAGGC CATTCGGCCT
GACACCATTC TGGTGACCAT CATGCATGCC AACAACGAAG TGGGCACGGT GCAGCCCATT
GCCGAAATTT CCGAACGGGT AAGAGCACGC GGCATTACCA TGCACACGGA CGCGGCCCAG
TCCCTGGGCA AAATCCCGGT GAATGTTTCA ACCCTGGGCG TGGACCTGCT GTCTGTTGCC
GGGCACAAGA TTTACGCGCC CAAGGGCATC GGCGCCCTTT ATATAAAAAA AGGGCTGGCC
CTGGAAAAGT TCTGCCACGG CGCTGGCCAG GAAACCGGCC GGCGGGCCGG AACCGAAAAC
GTGACCGGCA TTGTCGGTCT GGGCAAAGCC TGTGAAATTG CGACCAGGGA TCTGGAAGTG
AACCGGGTAC ACATGAAGGA TATGCGCGAC CGGCTGCACA GCGGGATCAG CGAGCGGGTG
GCGGATATGC GGTTAAACGG CCACCCTGAA AACCGGCTGC CCAACACGTT AAGCATGGCC
TTTAAAGAGC TGGAAGCAAA CCGCCTGCTG GAGGAGATCT GTCTGGAGGT GGCGGCCTCG
GCCGGGGCCG CCTGTCACAG CGACACGGTC ACCCTTTCCC ATGTGCTGGA GGCCATGGGC
GTGCCTGTGG AATGGGCCAA GGGCACCCTG CGGTTTTCAA CGGGCCGCAT GACCACTGCC
GAAGAGATCG ACCGGACCGT GGAGGTGGTG GCCGAAGCGG TGGCCCGGCT GCGTAAATCA
TAA
 
Protein sequence
MTRPIYLDYN GTTPLDPEVL EAMRPFWETE FGNPSSAHWY GIRPRQAVEA ARRQVAGLLG 
CLAEEVLFTS GGTESNNHAI LGMARALRHK GRHIVTSTIE HPAVLEVCQY LEKEGFETTR
VAVNELGMVD PAAAEQAIRP DTILVTIMHA NNEVGTVQPI AEISERVRAR GITMHTDAAQ
SLGKIPVNVS TLGVDLLSVA GHKIYAPKGI GALYIKKGLA LEKFCHGAGQ ETGRRAGTEN
VTGIVGLGKA CEIATRDLEV NRVHMKDMRD RLHSGISERV ADMRLNGHPE NRLPNTLSMA
FKELEANRLL EEICLEVAAS AGAACHSDTV TLSHVLEAMG VPVEWAKGTL RFSTGRMTTA
EEIDRTVEVV AEAVARLRKS