| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2118 |
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| Symbol | |
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| ID | 5694961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2572650 |
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| End bp | 2574491 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641264719 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001529999 |
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| Protein GI | 158522129 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000346834 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCCATTT CATTAAAAAC ACTGGTTCGG GGATGTTCAG GGTTTGTCAA TTTCGGTGCC
ATGATCCGGC TGACGCTGGG GTCGCGGCTG CGGGCGTGGC GGACCTTTTT TATTTTCGAG
GGCAGGGAAT ATACCTATGG CGAGGTGTAT GCCCAGGCAA AGCGGTACGC GGAGTTTTTT
GACGCGCTGC GGTGCCGGAG CATCGGGGCC GGGCGAATGG GAGAAAACGA CCGGCTGGCC
CTGGCCATTT ACCAGGAGAA CACGCCGGAG TACCTTTTTG CCTCTTTTGC CGCGGGCCTG
AGCAATGCCA CGCTGTTTGC CGTGAACACC GGCTTTCGGG GCAAGACCCT GGCCGGGGTG
GTGGAAAAGG CAAAGGCCCT TTTTCTGCTG ACCGATGAGG TGAGCGCGCC CGAGGTGGCG
GCGGTGCTGC CGGAATTAAA AACCCTGGGC CGGGAACATG TTCTGATCAC CGGGAATGCC
GGGCCGCAAA GCGCGGGGTT TACGCCCATC GAAACCGCCA TGGCGGACAT GGCCCTGAAC
GGCGGGCAGG CAAAATGCCC GGCCGTGGAC AATACCCGCC CGGTGCTGGT GATCTACACG
TCCGGCACCA CGGGCCTGCC CAAGGGCGTG CCCTGCACCC ATTTAAAGAT GATCGGGGCC
GGGGCCGTTG TCCAGAGCAC GGTGCGGCTG AAAAAAGAGG ACCGGGGTTA TATCTGCATG
CCCCTGTTTC ACTCCAATGC TTGGTATGTG GGGGTTTTGT CCATCATGAT TGCCGGGGCC
TCCTTTGTGC TCAAGCGTAA ATTTTCCGCC AGCGCTTTTG AATCCGACAT TCTGGAGCAT
GGCGTCACCT TCATGAATTA CGTGGGCCAG CCCCTTCACT ACATTCTGAC GGCCCTGGAG
AAAAAATACG GTTCTGCAGA AGACGTGGAA GCGGCCCTGG CGCACCATCC GAAAAATCGG
TTCCGTATCG CCTACGGCAA CGGCGCCACC GTGGTGGACC GGGTAAAGGT CAAAAAATGC
CTGAACATGG AGCATGTTTT TGAAATCTAC GGCTCCACCG AGGCGGTGAT CACCACGGCC
AACAAGCCGG GAGACCCGAT AGAGTCCATG GGCCGGGTGC CGGGGTCGGT GGTGATTTTA
AATGAGGCCG GAGCCGTCTG CGAGCCGGGC GTGGTGGGCG AAGACGGGCG GCTGGTCAAT
TATGACGCGG CCGTGGGCGA GATATGCAAA AAGGCGGGGA AAGACAACCT GCGGTTTGAC
GGCTACTATG ACGACAACGC GGCCACCTGC AAGAAGTTCC GCGATGACGG CTATTTTCAC
TCCGGGGACC TGGGCCACAT TCGCGTGGTC AACAACCGGC GCTATCTCTA TTTTAACGGC
CGCACCGATG ACTGGATTCG CAAGGACGGG GAGAACTTTT CCGCTGAAAG CGCGGCCGAG
TATGCCGCCA AAATTCCCAG CGTGGCTCTG GCCGTGGCCT ATGGCGCGCC CTGTGCGGTG
TCGGATGAAA AGGTCATGGC CACAATCCAG ATGCGTGAAA ACGTCGCCTT TGATCCGCAA
CAGGCCTTTG ACGCCCTGAT GGCCCAGCAG AAGACCGGCG GCATGGACCC CAAGTGGATG
CCCGACTATA TTCGCATCAT TGACGCCTTT AACGTGACCA GTACCCAGAA GATCCTGGTG
CGGCCGTTCA AGCAGCAGCA TTTCAACCTG GAAAAGCACC CGGACATGGT GGTGTATCAC
CGCCGGCGCG GAGACACTGC CTACCACCGG CTCACGCCCG AGGCCTATGC CGATATAAAG
GCGGAATTTG AGAAAAACGG TAGGGCCAGC CTGCTGGGGT AG
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| Protein sequence | MSISLKTLVR GCSGFVNFGA MIRLTLGSRL RAWRTFFIFE GREYTYGEVY AQAKRYAEFF
DALRCRSIGA GRMGENDRLA LAIYQENTPE YLFASFAAGL SNATLFAVNT GFRGKTLAGV
VEKAKALFLL TDEVSAPEVA AVLPELKTLG REHVLITGNA GPQSAGFTPI ETAMADMALN
GGQAKCPAVD NTRPVLVIYT SGTTGLPKGV PCTHLKMIGA GAVVQSTVRL KKEDRGYICM
PLFHSNAWYV GVLSIMIAGA SFVLKRKFSA SAFESDILEH GVTFMNYVGQ PLHYILTALE
KKYGSAEDVE AALAHHPKNR FRIAYGNGAT VVDRVKVKKC LNMEHVFEIY GSTEAVITTA
NKPGDPIESM GRVPGSVVIL NEAGAVCEPG VVGEDGRLVN YDAAVGEICK KAGKDNLRFD
GYYDDNAATC KKFRDDGYFH SGDLGHIRVV NNRRYLYFNG RTDDWIRKDG ENFSAESAAE
YAAKIPSVAL AVAYGAPCAV SDEKVMATIQ MRENVAFDPQ QAFDALMAQQ KTGGMDPKWM
PDYIRIIDAF NVTSTQKILV RPFKQQHFNL EKHPDMVVYH RRRGDTAYHR LTPEAYADIK
AEFEKNGRAS LLG
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