Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2057 |
Symbol | |
ID | 5694900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 2506452 |
End bp | 2508602 |
Gene Length | 2151 bp |
Protein Length | 716 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641264658 |
Product | (p)ppGpp synthetase I, SpoT/RelA |
Protein accession | YP_001529938 |
Protein GI | 158522068 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000250061 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATACGCA TCAACGACAT TTTAGAGACC CTGCAGGATC ACAATCCCGA CGCGCCAACC GATATCGTGG AGCGGGCCTA TATCTATTCG GCAAAGGTCC ATGAAGGACA GATGCGGCTT TCCGGCGAGC CCTATCTTTC CCATCCCCTG GAGGTGGCCG GCATCCTGGC TTCCATGCGG CTGGACAGCG TTTGCGTGGC CGCCGGACTG CTGCACGATG TGCTGGAAGA TACCCACGCC ACGGAAAAGG ACATTCAGGA AATGTTCGGC GACGAGGTGC TCCATATCGT TCAGGGGCTG ACCAAGATCA GCACGCTGCC CTACAGCAGC GACCAGGACC GCCAGGCTGA AAGCATCCGC AAGATGATCC TGGCCATGGC CGACGATCTT CGCGTTATCC TGATCAAGCT GGTGGACCGG CTGCACAACA TGCGGACCCT GAAATATCAC AAGGATGCCA AGCAGAAAAA AATTGCCCGG GAAACCCTTG ATATCTACGC GCCCATCGCC CTGCGCCTCG GGATTTACTG GATCAAGAAC GAGTTGGAGG ACATGGCTTT CCGAGTGCTC TATCCCGAAG AGAACGCGTT TCTGGCCAGC CGGATCCGTA CCGATGACGT GGAACGGGAA AAATATATCG AGACCGTCCG GGACTACATC AAGGAAAAGC TGGCGGAAAA TGGCCTTCAG GGAGAAGTGG TGGGCCGGCA CAAGCACTTT TACAGCATCT TTCAGAAGAT GAAAAAGCAG AACCTGGACC TGAATGAGGT CTACGACATC ATCGCCTTCC GTATCATTCT GGATACCATG CCCCAGTGTT ACGAGGCCCT GGGCATTATT CACTCCATGT GGAAACCCCT GGCCAAGAAG TTCAAGGACT ATATCGCGGT TCCCAAACCC AACCTTTATC AGTCCTTGCA TACAACGGTG TTTGGCCCCT TTGGCGAACG GGTTGAGATT CAGATTCGCA CAAAAGAGAT GGACCGGGTG GCCAAGTCCG GTGTGGCGGC CCATTGGGGG TACAAGGAGG GAAAGGATTC CACCGGCCGG GACGGCAAAA CCTATGCGTG GATTCAGAAT TTGGTGGAGA CTCAGGAAGA CGCGGAGACG TCCGGCGAAT TTCTGGAAAA TGTCCGGCTG GACCTTTTTT CCGACGAAGT TCACGTTTTT ACGCCTGAAG GGGCCGTTCG TTCCCTGGCC CGGGGGGCCA CGCCCGTTGA CTTTGCCTAC TTGATTCACA CCGAGGTGGG CCATCAATGC ACGGGCGCCA AGGTCAACGG CCGAATGGTG CCCCTCTCCC ACGTGCTGAG CACCGGCGAC ATCGTGGAGA TCATTACCTC TGCCAAGGGC CGGCCCAGCG CGGACTGGCT TAATTTTGTC AAAACCAGCA AGGCCCGTTC CCGGATTCGC CAGTGGATCA AAAACGAGGA AAAAGAGCGC AGCCTGCAAC TGGGCAGGGA GATGTGCGAA AAGATGTTTC GCAAGTTCCG CCTCAACTTC AACGAAGTCC TTCGGTCCGA GGAGATGGAA CAACTGCCGG CGGCTTTTGG GTTTAAAACC GTGGACAACC TGCTGGAGCA TGTGGGCTAC GGCAAGATCA CGCCCCGGCA GGTGCTGCAG AAATACATGG CCCGGGGGGA GGAAGCCCTT CCCGGGGACA GCGCGTCGTT TTTCGATAAA ATTATCAGCA AGGTGAGAAA GAAGCGACCG GCGGACGGCG TTATCGTTAA CGGCATGGAT GATGTGCTGG TCAAGTTTGC CAGGTGCTGC CAGCCCGTTC CCGGCGATTC CATCATCGGG TTTATCACCC GGGGTACCGG CGTGGCCGTC CATCGGGCCA ATTGCGTGAA CGTTCTCAAG GAGTCGCCCG AGCGCCGGAT TGACGTGCAG TGGGCCGCTG ACACGACAAC CGCCTACCCG GTGGAGATTG CCATCCGTTC CCACGACCGG ATCGGCCTGC TGGCCGAGAT CGCGTCGGTG ATCAGTAAAA ACGGGGCCAA TATCACCAGC GCCCATACCG AAACCAAGGA CAGGGGGCTG GTGGAAACCC ATTTTTCACT GCTGGTAAAA GGGGCGGCGC AGCTGGACAG CCTGATTGCC GCCATTAAAA AGCTCAAGGC CGTGTCTGAT GTGAAGCGGC TGGGTATGTG A
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Protein sequence | MIRINDILET LQDHNPDAPT DIVERAYIYS AKVHEGQMRL SGEPYLSHPL EVAGILASMR LDSVCVAAGL LHDVLEDTHA TEKDIQEMFG DEVLHIVQGL TKISTLPYSS DQDRQAESIR KMILAMADDL RVILIKLVDR LHNMRTLKYH KDAKQKKIAR ETLDIYAPIA LRLGIYWIKN ELEDMAFRVL YPEENAFLAS RIRTDDVERE KYIETVRDYI KEKLAENGLQ GEVVGRHKHF YSIFQKMKKQ NLDLNEVYDI IAFRIILDTM PQCYEALGII HSMWKPLAKK FKDYIAVPKP NLYQSLHTTV FGPFGERVEI QIRTKEMDRV AKSGVAAHWG YKEGKDSTGR DGKTYAWIQN LVETQEDAET SGEFLENVRL DLFSDEVHVF TPEGAVRSLA RGATPVDFAY LIHTEVGHQC TGAKVNGRMV PLSHVLSTGD IVEIITSAKG RPSADWLNFV KTSKARSRIR QWIKNEEKER SLQLGREMCE KMFRKFRLNF NEVLRSEEME QLPAAFGFKT VDNLLEHVGY GKITPRQVLQ KYMARGEEAL PGDSASFFDK IISKVRKKRP ADGVIVNGMD DVLVKFARCC QPVPGDSIIG FITRGTGVAV HRANCVNVLK ESPERRIDVQ WAADTTTAYP VEIAIRSHDR IGLLAEIASV ISKNGANITS AHTETKDRGL VETHFSLLVK GAAQLDSLIA AIKKLKAVSD VKRLGM
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