Gene Dole_2057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2057 
Symbol 
ID5694900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2506452 
End bp2508602 
Gene Length2151 bp 
Protein Length716 aa 
Translation table11 
GC content57% 
IMG OID641264658 
Product(p)ppGpp synthetase I, SpoT/RelA 
Protein accessionYP_001529938 
Protein GI158522068 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID[TIGR00691] (p)ppGpp synthetase, RelA/SpoT family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000250061 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACGCA TCAACGACAT TTTAGAGACC CTGCAGGATC ACAATCCCGA CGCGCCAACC 
GATATCGTGG AGCGGGCCTA TATCTATTCG GCAAAGGTCC ATGAAGGACA GATGCGGCTT
TCCGGCGAGC CCTATCTTTC CCATCCCCTG GAGGTGGCCG GCATCCTGGC TTCCATGCGG
CTGGACAGCG TTTGCGTGGC CGCCGGACTG CTGCACGATG TGCTGGAAGA TACCCACGCC
ACGGAAAAGG ACATTCAGGA AATGTTCGGC GACGAGGTGC TCCATATCGT TCAGGGGCTG
ACCAAGATCA GCACGCTGCC CTACAGCAGC GACCAGGACC GCCAGGCTGA AAGCATCCGC
AAGATGATCC TGGCCATGGC CGACGATCTT CGCGTTATCC TGATCAAGCT GGTGGACCGG
CTGCACAACA TGCGGACCCT GAAATATCAC AAGGATGCCA AGCAGAAAAA AATTGCCCGG
GAAACCCTTG ATATCTACGC GCCCATCGCC CTGCGCCTCG GGATTTACTG GATCAAGAAC
GAGTTGGAGG ACATGGCTTT CCGAGTGCTC TATCCCGAAG AGAACGCGTT TCTGGCCAGC
CGGATCCGTA CCGATGACGT GGAACGGGAA AAATATATCG AGACCGTCCG GGACTACATC
AAGGAAAAGC TGGCGGAAAA TGGCCTTCAG GGAGAAGTGG TGGGCCGGCA CAAGCACTTT
TACAGCATCT TTCAGAAGAT GAAAAAGCAG AACCTGGACC TGAATGAGGT CTACGACATC
ATCGCCTTCC GTATCATTCT GGATACCATG CCCCAGTGTT ACGAGGCCCT GGGCATTATT
CACTCCATGT GGAAACCCCT GGCCAAGAAG TTCAAGGACT ATATCGCGGT TCCCAAACCC
AACCTTTATC AGTCCTTGCA TACAACGGTG TTTGGCCCCT TTGGCGAACG GGTTGAGATT
CAGATTCGCA CAAAAGAGAT GGACCGGGTG GCCAAGTCCG GTGTGGCGGC CCATTGGGGG
TACAAGGAGG GAAAGGATTC CACCGGCCGG GACGGCAAAA CCTATGCGTG GATTCAGAAT
TTGGTGGAGA CTCAGGAAGA CGCGGAGACG TCCGGCGAAT TTCTGGAAAA TGTCCGGCTG
GACCTTTTTT CCGACGAAGT TCACGTTTTT ACGCCTGAAG GGGCCGTTCG TTCCCTGGCC
CGGGGGGCCA CGCCCGTTGA CTTTGCCTAC TTGATTCACA CCGAGGTGGG CCATCAATGC
ACGGGCGCCA AGGTCAACGG CCGAATGGTG CCCCTCTCCC ACGTGCTGAG CACCGGCGAC
ATCGTGGAGA TCATTACCTC TGCCAAGGGC CGGCCCAGCG CGGACTGGCT TAATTTTGTC
AAAACCAGCA AGGCCCGTTC CCGGATTCGC CAGTGGATCA AAAACGAGGA AAAAGAGCGC
AGCCTGCAAC TGGGCAGGGA GATGTGCGAA AAGATGTTTC GCAAGTTCCG CCTCAACTTC
AACGAAGTCC TTCGGTCCGA GGAGATGGAA CAACTGCCGG CGGCTTTTGG GTTTAAAACC
GTGGACAACC TGCTGGAGCA TGTGGGCTAC GGCAAGATCA CGCCCCGGCA GGTGCTGCAG
AAATACATGG CCCGGGGGGA GGAAGCCCTT CCCGGGGACA GCGCGTCGTT TTTCGATAAA
ATTATCAGCA AGGTGAGAAA GAAGCGACCG GCGGACGGCG TTATCGTTAA CGGCATGGAT
GATGTGCTGG TCAAGTTTGC CAGGTGCTGC CAGCCCGTTC CCGGCGATTC CATCATCGGG
TTTATCACCC GGGGTACCGG CGTGGCCGTC CATCGGGCCA ATTGCGTGAA CGTTCTCAAG
GAGTCGCCCG AGCGCCGGAT TGACGTGCAG TGGGCCGCTG ACACGACAAC CGCCTACCCG
GTGGAGATTG CCATCCGTTC CCACGACCGG ATCGGCCTGC TGGCCGAGAT CGCGTCGGTG
ATCAGTAAAA ACGGGGCCAA TATCACCAGC GCCCATACCG AAACCAAGGA CAGGGGGCTG
GTGGAAACCC ATTTTTCACT GCTGGTAAAA GGGGCGGCGC AGCTGGACAG CCTGATTGCC
GCCATTAAAA AGCTCAAGGC CGTGTCTGAT GTGAAGCGGC TGGGTATGTG A
 
Protein sequence
MIRINDILET LQDHNPDAPT DIVERAYIYS AKVHEGQMRL SGEPYLSHPL EVAGILASMR 
LDSVCVAAGL LHDVLEDTHA TEKDIQEMFG DEVLHIVQGL TKISTLPYSS DQDRQAESIR
KMILAMADDL RVILIKLVDR LHNMRTLKYH KDAKQKKIAR ETLDIYAPIA LRLGIYWIKN
ELEDMAFRVL YPEENAFLAS RIRTDDVERE KYIETVRDYI KEKLAENGLQ GEVVGRHKHF
YSIFQKMKKQ NLDLNEVYDI IAFRIILDTM PQCYEALGII HSMWKPLAKK FKDYIAVPKP
NLYQSLHTTV FGPFGERVEI QIRTKEMDRV AKSGVAAHWG YKEGKDSTGR DGKTYAWIQN
LVETQEDAET SGEFLENVRL DLFSDEVHVF TPEGAVRSLA RGATPVDFAY LIHTEVGHQC
TGAKVNGRMV PLSHVLSTGD IVEIITSAKG RPSADWLNFV KTSKARSRIR QWIKNEEKER
SLQLGREMCE KMFRKFRLNF NEVLRSEEME QLPAAFGFKT VDNLLEHVGY GKITPRQVLQ
KYMARGEEAL PGDSASFFDK IISKVRKKRP ADGVIVNGMD DVLVKFARCC QPVPGDSIIG
FITRGTGVAV HRANCVNVLK ESPERRIDVQ WAADTTTAYP VEIAIRSHDR IGLLAEIASV
ISKNGANITS AHTETKDRGL VETHFSLLVK GAAQLDSLIA AIKKLKAVSD VKRLGM