| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2022 |
|---|
| Symbol | |
|---|
| ID | 5694862 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 2450679 |
|---|
| End bp | 2451272 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641264620 |
|---|
| Product | cobalamin (vitamin B12) biosynthesis CbiM protein |
|---|
| Protein accession | YP_001529903 |
|---|
| Protein GI | 158522033 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0310] ABC-type Co2+ transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00123] cobalamin biosynthesis protein CbiM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000000920884 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCATATTT CTGAAGGTAT TTTATCGTGG CCGGTGCTGG CCGGGTGCGG GGCCGTGGCC
CTGGCCGGCA CTGCCGTGGG AATCCGGAAA CTGGACCCTG AAAAGATTCC CCGCACCGGC
ATGCTGTCGG CGGCCTTTTT CGTGGCATCG CTGATCCATG TGCCGCTGGG GCCTTCCAGT
GTTCACCTGA TATTAAATGG CATGGTCGGT CTGATCCTGG GGTGGAGTGC CTTTCCCGCC
ATCTTTGTCG CCATTCTGCT GCAGGCGGTG CTGTTTCAGT ACGGGGGCAT CACCACGCTG
GGGGTCAACA CGATGATCAT GGCGGTTCCG GCGCTGTTGA GCTATTATCT TTTCCGTCCC
TTTGCCGGAA GAGGAGATTC TCTGGTGTTT GCCGGCGCCT TTTTGTGCGG CATGGTTGCG
GTGCTGACCG GCGGGTTTCT GGCCGCGGTG GTGCTGATCT GGTCCGAGGA GCGGTTCCTT
GAAGTGGCCC TGCTGATTGT TACCGCTCAT CTGCCGGTTA TGGTGGCGGA AGGCCTGATC
ACAGGGTTTG CGGTTCTTTT TTTGAAAAAG GTCAAGCCGG ACCTGCTTGA ATAA
|
|---|
| Protein sequence | MHISEGILSW PVLAGCGAVA LAGTAVGIRK LDPEKIPRTG MLSAAFFVAS LIHVPLGPSS
VHLILNGMVG LILGWSAFPA IFVAILLQAV LFQYGGITTL GVNTMIMAVP ALLSYYLFRP
FAGRGDSLVF AGAFLCGMVA VLTGGFLAAV VLIWSEERFL EVALLIVTAH LPVMVAEGLI
TGFAVLFLKK VKPDLLE
|
|---|
| |