| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2018 |
|---|
| Symbol | |
|---|
| ID | 5694858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 2448081 |
|---|
| End bp | 2448281 |
|---|
| Gene Length | 201 bp |
|---|
| Protein Length | 66 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641264616 |
|---|
| Product | cold-shock DNA-binding domain-containing protein |
|---|
| Protein accession | YP_001529899 |
|---|
| Protein GI | 158522029 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1278] Cold shock proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000024802 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCTGACG GTATTGTAAA GTGGTTTAAT GAGAAAAAGG GGTTTGGTTT TATCGAAGTG
GACGAAAGCA ACGATGTGTT TGTTCACTAT TCCGCAATCA CAATGCCCGG ATTCAAAACG
CTTTCTGAAG GGGACAGGGT CTCGTTTGAG ATTGAAGACA CGGACCGGGG GCCTGCCGCA
AAGAACGTTG TAAGGGCTTA A
|
|---|
| Protein sequence | MADGIVKWFN EKKGFGFIEV DESNDVFVHY SAITMPGFKT LSEGDRVSFE IEDTDRGPAA
KNVVRA
|
|---|
| |