Gene Dole_2013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2013 
Symbol 
ID5694853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2438746 
End bp2439978 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content58% 
IMG OID641264611 
Productpeptidase M29 aminopeptidase II 
Protein accessionYP_001529894 
Protein GI158522024 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2309] Leucyl aminopeptidase (aminopeptidase T) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0975831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGAAGTG ACAGAAAAAA GGAGGCCGAC GCCATGCTGA CGAAAAAACA GCTTTCAAGA 
TACGCGGACG TGCTGGTCTG GGGAATGTCA AAGGCACGGT CCGTTCCTTT TAAAAAGCAT
GATATCGTGG TGATCCGATA CGACATGCCG GCCACGGCCC TGGCTGAAGT CCTCTATGAA
AAACTGCTGG CAGCGGGCCG GCAGGTGGTA TTGCGGGCCG GCCAGACCGC GGTGATGGAA
GAGACCTTCT ACCGGTGCGC CGACGCCGAG CAACTGGTCT TCCTGGCCCC CGGGGACCGG
GAGCTGATAA AAAACGTCAA CGGCAACATC AGCCTGCTTG CGCCTGACTC CCTGACCCAT
CTGAGCACAA TCGACCCGAT GAAGATCGGC AAGGCGGCCG CGGCCCGCAA ACCCCTTCGC
GACATTCTCG ACAAACGGGA AAGCAACGGC GATTTTGCGT GGACCCTCTG CCTCTGCCCG
ACTGCAGAAC TGGCCCGGCA TGCCGGCCTT TCACTGGAGG ACTATACCCG GCAGATCGTG
AAGGCCTGTT TTCTGGACAA AAAAGACCCC ACGGCCCACT GGGAGACGAT CTTTCAAAAA
GCAGCGGCCA TTAAAAAATG GCTCAACAGC ATGGAAATAA AGGTGCTGCA CATCGCGTCC
GAACACACCG ACCTGGAGAT CACGCCCGGC AAAAAAAGAA AGTGGGTGGG CATCTCCGGC
CACAACATTC CCAGCTTTGA AATTTTCCTG TCGCCGGACT GGCGGGGCTC CCGGGGGGTC
TATTTCGCGG ACATGCCCTC TTTTCGCAAC GGCAACCCGG TGCGCGACAT GCGGGTGGAG
TTCAAGGATG GGAAGGCCGT CAAGGTGACG GCCAGGGCGG GCCAGGCATT TGCGCGCAAG
TACCTTTCCA CGGACCCGGG CGCGGCCCGG CTGGGCGAGT TTTCCCTCAC GGACAAACGG
TTCTCGCGAA TCGATAAGTT TATGGCCAAC ACCCTGTTTG ACGAAAACTT CGGCGGGGCC
AACGGCAACT GCCACGTGGC CCTGGGAGCC TCCTATGCCG ACACCTTTGC CGGCAACCCG
GCGGCCCTGA CCAAAACAAT GAAGCAACAA CTGGGGTTCA ATGATTCGGC CATTCACTGG
GACATCGTGA ACACGGAAAA AAAGCGGGTG ACTGCCGTGC TTGAAAACGG GGAGAAAACA
ACGATTTACG AAAACGGTAA GTTCACATAT TAG
 
Protein sequence
MGSDRKKEAD AMLTKKQLSR YADVLVWGMS KARSVPFKKH DIVVIRYDMP ATALAEVLYE 
KLLAAGRQVV LRAGQTAVME ETFYRCADAE QLVFLAPGDR ELIKNVNGNI SLLAPDSLTH
LSTIDPMKIG KAAAARKPLR DILDKRESNG DFAWTLCLCP TAELARHAGL SLEDYTRQIV
KACFLDKKDP TAHWETIFQK AAAIKKWLNS MEIKVLHIAS EHTDLEITPG KKRKWVGISG
HNIPSFEIFL SPDWRGSRGV YFADMPSFRN GNPVRDMRVE FKDGKAVKVT ARAGQAFARK
YLSTDPGAAR LGEFSLTDKR FSRIDKFMAN TLFDENFGGA NGNCHVALGA SYADTFAGNP
AALTKTMKQQ LGFNDSAIHW DIVNTEKKRV TAVLENGEKT TIYENGKFTY