| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1980 |
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| Symbol | |
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| ID | 5694820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2395843 |
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| End bp | 2396742 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641264578 |
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| Product | signal peptide peptidase SppA, 36K type |
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| Protein accession | YP_001529861 |
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| Protein GI | 158521991 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000026819 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTCCA GAAGACATCC GTTTCTTTTT TTCATCCTGG TGCTGTCTGC CATTGTGTTT
GGTTCAGCCA CGGTTATTTC TTTTGTGGTG GGCCTCTATT CGGGCAAACC CGCTTTCGAG
TCCGGTGAAA GGGTGGGGAT TGTGGAGGTG AAGGGGGTTA TTCTCTCTTC TGAACAGGTG
ATCGAAGAAC TGAAAACCTT TCGTGAGGAG GATGCCATTC GGGCCATTGT GGTGCGCATC
GACTCGCCCG GTGGTGCCGT GGGACCGGCC CAGGAGATAT TCCGGGAAAT TCATAAAACC
GCTGCAACCA AAAAGGTTGT GGCCTCCATG GGCTCCGTGG CCGCGTCGGG CGGCTATTAT
GTGGCGTCGG CAACGGAAAA AATATTTGCC AATCCCGGCA CATTGACCGG CAGTATCGGC
GTGATCATGA GCTACACCAA CTTTCAGGAG CTGATGGACA AGATTGGGCT GCTGCCCGTG
GTGATCAAAA GCGGCAAATA CAAGGATATC GGGTCTCCGG TGAGACCCCT GGAAGAACGC
GAAAAACGGA TTCTTCAGGA GTTTGCCGAT GATATTCACC AGCAGTTTAT TGATGACGTG
GCCGCCGGCA GAAACATGGA TGCCGGGGCG GTGGCGAAGC TGGCGGACGG CCGCATCTAC
ACCGGCAGAA AAGCCCTGGA GCTGGGCTTG GTGGATGAAC TGGGCAACCT GGAAGACGCG
GTGGAAACCG TCGGCCGGAT GGCGGGCATT AAAGGCGATA TTGTTCAGGT CTACCCGGAA
AGAAAGACAA AGTTTTCCCT GACCGAACTG TTGACAGGCT CCTCAGCCGA AGAGCTGGCA
AACACACTGA TGCACGGTCA GGCTCTTTCC GCCGGCTACC TTTACCGGCC GGGATTGTAA
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| Protein sequence | MFSRRHPFLF FILVLSAIVF GSATVISFVV GLYSGKPAFE SGERVGIVEV KGVILSSEQV
IEELKTFREE DAIRAIVVRI DSPGGAVGPA QEIFREIHKT AATKKVVASM GSVAASGGYY
VASATEKIFA NPGTLTGSIG VIMSYTNFQE LMDKIGLLPV VIKSGKYKDI GSPVRPLEER
EKRILQEFAD DIHQQFIDDV AAGRNMDAGA VAKLADGRIY TGRKALELGL VDELGNLEDA
VETVGRMAGI KGDIVQVYPE RKTKFSLTEL LTGSSAEELA NTLMHGQALS AGYLYRPGL
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