Gene Dole_1976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1976 
Symbol 
ID5694816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2390703 
End bp2392604 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content60% 
IMG OID641264574 
Productacetyl-CoA hydrolase/transferase 
Protein accessionYP_001529857 
Protein GI158521987 
COG category[C] Energy production and conversion 
COG ID[COG0427] Acetyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGCCC GATACTGGCC TGATGAATAT GTCCGGAAAA AAAGAACCGC CAAAGAGGCC 
CTGTCGGTTC TCAAGTCCGG TCGCCGGATA TTTATCGGTT CTTCCTGCGG AGAGCCTCAG
CACCTGGTGA ACACCCTGGT GGAAGAGGCC GACCGGTTCT CCGACCTGGA AATCGTCCGG
CTGATGGGGC TCGAGCGATC ACCCATCACG CGCCTGGTCA ACCAGGACCG GCTGAACAGC
TTCCATGTCC GCAACATTTA CCAGGGCGCC GGCGATGCCC GCCACCTGGC GCCCAGCCGG
CCGTTTATCA CCCCCATCAA CATGTCGGCG GTGCCGGACC TGTTCCGCAA GAACCAGCTT
CCCCTGCACG CGGCCCTGAT TCAGACCTCG CCGCCGGACG ACTTCGGCTG GATGAGCCTG
GGTATATCGG TGGATGTGGG CATGGCCGCC GCCACGTCCG CGGATATCGT CATTGTCCAG
GTCAATGCCC GCATGCCCCG GGTCCTGGGG CACAGCTTCA TCCATGTCAA TGACGTTGAC
TTTGTCGTGG AGTGCGATGA GCCGCTTTAC ACCATTCCGG AGCTGCCCGA GCTCGAATCG
GCGCACAAGA TCGGTCGGCT GGTGGCCAAC CTGATCGAAG ACGGTTCCAC CTTTCAGCTG
GGCCTGGGCG CAACACCCAA GGCCATCCTG CTGGCCCTGT CCGAAAAAAA CGACCTGGGG
GTCCATACCC AGTTTGTCAT CGACGGTATC ATGGACCTGG TCTCCCGGGG TGTGATCACC
AATCGGCGCA AGGGGCTCAA TGAGGGCAAG ATCGTGGCCA GCAACGCCGT GGGAACGGAA
AATCTGTACG AGTTTGTTCA CGACAACCCC TCTATTGAGT TCTTCCCGGC CGATTATGTC
AGCAATCCCG GGGTTATCGC CCGCCACAAC AAGATGGTGG TGGTCAACAT GGTAAAGGAG
ATGGACCTTG TGGGCCAGGC CTCGGTGGAC GCCCTGCCGC ACAACTACTT CGCGGGCGTC
TCCAGCATTC CGGACTTTGT TCATGGCGCG GCCATGGCCC CGGGAGGCCG GTCGATTTTG
CTGATTCCCA GCACCTCGGT GGACAGGAAG ACCAGCCGCA TCGTGCCCCG GCTGTCGGGC
AACGTGGTGG TTTCCATGAA CGATGCCGGG TTCGTGGTCA GTGAATTCGG CGCGGTCAAC
CTGTTCGGCA AAAACCTTCA GGAGCGGGCC ACGGCCATGA TCTCCCTGGC CCATCCCGAC
TTCCGGGAAG CGCTTTTTGA ACAGGCTCGG GACATGGGAT TACTGGCGCC GGGCCGCAAA
TTGAGCGAAT CCCTGCGCGG CGTATACCCG GCCGGCCTGG AAGAGACCCG GACCTACGAC
GGCCAAACCG TCAAGTTCCG GCCGGCCAAA CCCGTGGATG ACCGGCGCAT TCAGGAACAC
TTTTACAACC TGGACAAAAA GGATGTGATC GCCCGGTTTT TTCAGAATAA GACCTGTTTT
TTCAGGGACG ACCTCGAAGG AATGTATGAA ATCGACTACA TCAAGAACCT CACCATTCTG
GCGGTCACCG GTGACTTCGG GTTCGGCGAG GTGGTGGGCA TCGGGGCCTA CATGCTGGAG
TCCCCCGGCA ACATGGCCGA AGTGGCTTTT TCGGTGAGCC GGCCGTGGCA GGGAAAAGGC
ATTGCCACCG TGATCCTGCA CAAGCTGGCC TATGCCGCCA TGGGCAACGG CATCGCCGGC
CTGGTGGCCT ATACCGAACC GGCCAACACG GCCATGAAAA AGCTGTTTGC CACGCTGCCC
TATGCGATAA AGACCAGCCG GGATACGGAC ATGGTGACCA TGACCTGTTA TTTAAACGAC
GAACAGCCGG CACCGGATGC CGGCCCGGCC CAACGTGATT GA
 
Protein sequence
MQARYWPDEY VRKKRTAKEA LSVLKSGRRI FIGSSCGEPQ HLVNTLVEEA DRFSDLEIVR 
LMGLERSPIT RLVNQDRLNS FHVRNIYQGA GDARHLAPSR PFITPINMSA VPDLFRKNQL
PLHAALIQTS PPDDFGWMSL GISVDVGMAA ATSADIVIVQ VNARMPRVLG HSFIHVNDVD
FVVECDEPLY TIPELPELES AHKIGRLVAN LIEDGSTFQL GLGATPKAIL LALSEKNDLG
VHTQFVIDGI MDLVSRGVIT NRRKGLNEGK IVASNAVGTE NLYEFVHDNP SIEFFPADYV
SNPGVIARHN KMVVVNMVKE MDLVGQASVD ALPHNYFAGV SSIPDFVHGA AMAPGGRSIL
LIPSTSVDRK TSRIVPRLSG NVVVSMNDAG FVVSEFGAVN LFGKNLQERA TAMISLAHPD
FREALFEQAR DMGLLAPGRK LSESLRGVYP AGLEETRTYD GQTVKFRPAK PVDDRRIQEH
FYNLDKKDVI ARFFQNKTCF FRDDLEGMYE IDYIKNLTIL AVTGDFGFGE VVGIGAYMLE
SPGNMAEVAF SVSRPWQGKG IATVILHKLA YAAMGNGIAG LVAYTEPANT AMKKLFATLP
YAIKTSRDTD MVTMTCYLND EQPAPDAGPA QRD