| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1969 |
|---|
| Symbol | |
|---|
| ID | 5694809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 2380431 |
|---|
| End bp | 2381549 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641264567 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001529850 |
|---|
| Protein GI | 158521980 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAATAG GCATTAACGC GCTCTATCTG CTTCCAGGCA AGGTCGGGGG CTCGGAAACA
TATATCAGAA ACCTTGTGAA GCACCTCGAT CTTCTCGGCG GGGATAATAC CTATTTTATT
TTTATAAACA AGGAAAGCAT CGGTGTATTT CCGGAAACGT CGCGCATAAA GACAGTGCTT
TGCCCCATCC ACGCTGCCAG TCGTCCGATC CGTATACTTT GGGAACAATG CATCCTGCCT
TTTCAAATTA AAAAATATAA CATTGATGCC GTACTTTCGG CAGGAATGAC GGCTCCTTTC
TTCTGTCCGG CGCGGTCGAT TCTCACCATC TTAGATCTTC AGCATATCAA TCAGCCGCAG
AATTTTTCAC GCTTTCATCT GTTTTTCCTG AGGTCGATAA TCTACTTGAG CGCAAAAACC
GCAGACGGCA TAATGACCAT TTCCGAGCAT GTAAAACAGG ACATCGTGAA GTTTTACAAA
ATACGTCCGG AAAAGATCGC CGTGGGCTAT CTCGCTGTAC AGCATAATAT TTTTACGCCC
GCAGCCGGGA AGGACGATTT GGCTATAAGA GCAAAGTATG GTCTCCCTGA GCGTTATATT
CTTTATGCCG CAGCTTTATT GCCCCACAAG AACCATGAGC GGCTTTTAAC GGCATTTAAA
GCGGTTAAAG ACAAGATCCC CGGTAAAAAG CTTGTGTTTA CCGGTGCGTG GAACCAGGGA
TACGATAAGG TCGCAAACAC AATCTCTGCG TTGGACCTGA AAAAAGATGT CATCATGCTT
GGCTGGCTTC CTTTCGAAGA GATATCCGCG GTCTTTCGCG GGGCGGAGCT GTTCGTCTAT
CCCACCCTTC ATGAAGGGTT CGGTCTCCCT ATTCTGGAAG CCATGGCGAG CGGCGTGCCG
GTTGTCTGCT CAAAAATCGA ACCGCTCATC GAGGTTTCGG GGGATGCGTC GATGTTTGTG
GATCCTTTGG ACCCTGCCGA CATTGCGAAC GGGATTTTGT CCGTCCTTAC CCAAAACCAC
CTTCGGGAAC ACCTTGTGGA AAAAGGTGCA AAACGCGCAC GTCAATTCAC GTGGGAAGCA
ACAGCGCAAA CAACGCTTGT GTTTCTTAAT CGGGCATAG
|
|---|
| Protein sequence | MKIGINALYL LPGKVGGSET YIRNLVKHLD LLGGDNTYFI FINKESIGVF PETSRIKTVL
CPIHAASRPI RILWEQCILP FQIKKYNIDA VLSAGMTAPF FCPARSILTI LDLQHINQPQ
NFSRFHLFFL RSIIYLSAKT ADGIMTISEH VKQDIVKFYK IRPEKIAVGY LAVQHNIFTP
AAGKDDLAIR AKYGLPERYI LYAAALLPHK NHERLLTAFK AVKDKIPGKK LVFTGAWNQG
YDKVANTISA LDLKKDVIML GWLPFEEISA VFRGAELFVY PTLHEGFGLP ILEAMASGVP
VVCSKIEPLI EVSGDASMFV DPLDPADIAN GILSVLTQNH LREHLVEKGA KRARQFTWEA
TAQTTLVFLN RA
|
|---|
| |