Gene Dole_1967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1967 
Symbol 
ID5694807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2378263 
End bp2379165 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content48% 
IMG OID641264565 
Productglycosyl transferase family protein 
Protein accessionYP_001529848 
Protein GI158521978 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCATTG AAAAGATTGC CACTACACCT AAAGTCAGTA TCGGTATTCC CACCTATAAT 
CGTGCCGATC TGTTGCGCCG TTCGATTGAG TCGGCCCTGG GGCAGGACTA TCCGAACATC
GAGGTGCTGG TATCGGACAA TGCGTCAACC GACAGAACAC CGGAAGTTTG TCAATTTTAT
ACCGACACTC ATGGCAGCCG GATAAAATAT ATTCGGCAAC CCGTCAATCT GGGAGCAACC
GCTAATTTCT CAAAAGTCCT TGAAATGGCC TCCGGCGAAT TTTTTATGTG GCTTGGAGAT
GATGACTGGA TTGATTCATC TTATGTGAAG TCCTGTATGC GGGAGTTGCT TTCAGACCCC
GCGTTATCCC TGGTAAGCGG AAGCCCTCGA TACTATCGCA GTGGCGTACC GGCCTGTGAC
GGCAGATGGT TCAACCTTTT ACAAGAACGG TGGTGGCTAA GGGTTCTTGT ATATTATATA
AAGGTTTCGG ATAATGGTAT GTTTTATGGC TTGATGCGCA CAGCGCAAAT CAGACAGATT
AACCTGTCGA ATACAATGGG TGGAGACTGG CTGCTTATTG CCGGCCTGTC GGCCCTGGGC
AAGCTCAAAA CCGTCCCGGA TACCCATGCC CACCGTGAGT TGGGTGGTGC GACCCTGAGT
TACCGTCAAA TTGCCCGTTC AATGGGGCTG TCAAGGATGC AGGCGATGTT TCCCATGGTA
TCTATTGCAA AAGCCGCATG GGTTGATATC GTCTTTAAAG GGGCTGCGTA CGAATCACGC
TCTATCTGGG GAAAACTGGT GATTGGTTCA TCTGTTTTTG GATTGATTCT CCTGAAACGT
CCTGTATTCT GGATATTAGC GATGAAATTT ATTATCAAGA AGAAATTATT CCCTTCGGTT
TAA
 
Protein sequence
MIIEKIATTP KVSIGIPTYN RADLLRRSIE SALGQDYPNI EVLVSDNAST DRTPEVCQFY 
TDTHGSRIKY IRQPVNLGAT ANFSKVLEMA SGEFFMWLGD DDWIDSSYVK SCMRELLSDP
ALSLVSGSPR YYRSGVPACD GRWFNLLQER WWLRVLVYYI KVSDNGMFYG LMRTAQIRQI
NLSNTMGGDW LLIAGLSALG KLKTVPDTHA HRELGGATLS YRQIARSMGL SRMQAMFPMV
SIAKAAWVDI VFKGAAYESR SIWGKLVIGS SVFGLILLKR PVFWILAMKF IIKKKLFPSV