Gene Dole_1965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1965 
Symbol 
ID5694805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2375910 
End bp2376692 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content53% 
IMG OID641264563 
Productcephalosporin hydroxylase 
Protein accessionYP_001529846 
Protein GI158521976 
COG category[V] Defense mechanisms 
COG ID[COG3510] Cephalosporin hydroxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAAG ATGCCATACA GCTGTTTATG AACGCCCGCC GTCAGCGCGT TGAATCCTAC 
AAGGAAAGCC AGATGAAAAA GGTGGCCGAA GAGTTCATGA GAACCAGTAT CATGCCCGGC
TACTCCTACA ACTTTGACTG GCTCGGCCGG CCGATCATTC AGTACCCCCA GGACATGGCC
GCCATGCAGG AATTAATCTG GAAGGTCAAG CCGGACCTGA TTCTTGAAAC CGGCATTGCC
CACGGCGGAT CATTGATTTT TTCCGCCTCC ATGCTGGCCC TGCTTGAATA TTGTGATGCC
GCGGAAAAAG GCGAGCTATT GGACCCCGGC AATCCCATTC GTCGGGTGCT GGGCATTGAT
ATCGATATCC GCGAACATAA TCGCGCCGCC ATTGAGGCCC ATCCCATGGC CGGCCGCATT
CAAATGATTC AAGGGTCTTC GGTTGACGCC GAGGTCATTC AAAAAGTCCA TGCCGTTGCA
AAAGAGTTCA GCCGGATTCT GGTCTGCCTT GACTCCATGC ACACCCATGA CCATGTGCTG
GCGGAACTGG AGGCTTACGC CCCCCTTGTC AGCCCGGGAA GCTACTGCAT GGTGTTTGAC
ACCATCGTCG AGGACCTGCC GGAAGATTTT TTTTCGAATC GGCCCTGGGC TAAAGGCAAT
AACCCTAAAA CCGCCGTCCA TGAATTTTTA AAAACGCACC GGGAATTTGA AATTGACAAG
GAGATCGAGC ACAAGCTGCT GATCACTGTT GCACCGGACG GTTATTTGAA GAGGGTCGAA
TAA
 
Protein sequence
MNEDAIQLFM NARRQRVESY KESQMKKVAE EFMRTSIMPG YSYNFDWLGR PIIQYPQDMA 
AMQELIWKVK PDLILETGIA HGGSLIFSAS MLALLEYCDA AEKGELLDPG NPIRRVLGID
IDIREHNRAA IEAHPMAGRI QMIQGSSVDA EVIQKVHAVA KEFSRILVCL DSMHTHDHVL
AELEAYAPLV SPGSYCMVFD TIVEDLPEDF FSNRPWAKGN NPKTAVHEFL KTHREFEIDK
EIEHKLLITV APDGYLKRVE