Gene Dole_1964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1964 
Symbol 
ID5694804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2374804 
End bp2375862 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content50% 
IMG OID641264562 
Productmethyltransferase type 11 
Protein accessionYP_001529845 
Protein GI158521975 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCATA AAACCATCCT TGAGATCCCG GATCTCCCGG TGTTACAAAA CAGGGTTTAC 
AATACCCGGG CGGAAGCCAT GGCGTGTGTC AGGGGAGACA TGCGGTTGGC CCAAAGCCCC
CTTCACGGCA TTGTGTCCAA TGTGGCTTTT CAGCCTGAAA AAGTAGTATA TGACAAAAAC
TATCAGAACG AACAGGGATG TTCAGCCGTC TTCACCCGGC ATTTAGACCA GGTCGCCGGT
ATTATTGAAA AACATGGTGC CGGGAAAACC GTCCTTGAAG TGGGGTGCGG AAAAGGCACT
TTTACGGAGA TGCTGCATAC CCGCAATATG GCTATAACCG GGCTTGATCC CGCCTATGAA
GGGAACGCGC CATACATCAT CCGGGAGCAC TTCTCTCCAG CGCTCGGGGT GACCGGTGAT
GTGATTGTCC TGCGCCATGT ACTTGAACAC ATCGCCCTCC CCTTTGAGTT TCTTAAACAA
ATAGCAACTG CCAACGGCGG AAAAGGATTG ATTTATATAG AAGTCCCCTG CCTGGACTGG
ATCATGGAGA ACCACGCATG GTTTGATATT TTTTACGAAC ATGTTAACTA TTTCAGACTT
TCTGACTTCA ACCGGTTTTT CGGAAAAATC ATAGACAGCG GCCGATTTTT TGGCGGCCAG
TATATTTTTG TCGTGGCCGA CATCGCGTCA CTTGGCCTCA ACGACTCCGT AAATAGTGAG
GTCTTTTCTA CCCCTTCTGA TTTTTTTTCA GGCATTGATG ATGCCATCGA CATTATAACC
AAGACACCCG GCAGGCTGCA TGTCGTGTGG GGCGCCGCCT CCAAGGGAGT CCTGTTTTCG
CTGCACCTTC ACCGGAGAGG CCATATTCCG GACTTTGCCA TTGATATCAA TCCGGCAAAA
CAGAACAGAT ACCTTCCGGC CACTGGGTTG CACGTGCTGA GCCCGGAATC CGCTTTTGAA
AGGCTGCGGC CGGGGGATGT TATTTTTGTA ATGAACCCGA ACTATCTTGA CGAAATCAGA
AGCCAGAGCG GAACGAAATA CCAGTATGTT TTGCCATAA
 
Protein sequence
MSHKTILEIP DLPVLQNRVY NTRAEAMACV RGDMRLAQSP LHGIVSNVAF QPEKVVYDKN 
YQNEQGCSAV FTRHLDQVAG IIEKHGAGKT VLEVGCGKGT FTEMLHTRNM AITGLDPAYE
GNAPYIIREH FSPALGVTGD VIVLRHVLEH IALPFEFLKQ IATANGGKGL IYIEVPCLDW
IMENHAWFDI FYEHVNYFRL SDFNRFFGKI IDSGRFFGGQ YIFVVADIAS LGLNDSVNSE
VFSTPSDFFS GIDDAIDIIT KTPGRLHVVW GAASKGVLFS LHLHRRGHIP DFAIDINPAK
QNRYLPATGL HVLSPESAFE RLRPGDVIFV MNPNYLDEIR SQSGTKYQYV LP