| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1960 |
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| Symbol | |
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| ID | 5694800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 2371095 |
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| End bp | 2372183 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641264558 |
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| Product | CDP-glucose 4,6-dehydratase |
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| Protein accession | YP_001529841 |
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| Protein GI | 158521971 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR02622] CDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACC TTTTTCAGAA CGCGTATCAC CGCCGGAGAG TGCTGGTCAC CGGGCATACC
GGCTTTAAAG GGTCATGGCT CTCCTTCTGG CTTTCGCAAA TGGGCGCCGA TGTGTACGGC
TACTCCCTGG CGCCCGAGAC CCGGCCCAAT CACTTCTCTC TGCTCAACCC GGGTGACGAA
ACCCCTGAAA CCGACATCCG GGATATCCGA CAAGTAATTG ACTGCTTTCA GTCCTTTCAG
CCGGAAATCG TTTTTCACCT GGCCGCTCAG TCCCTGGTGC GCCGGTCCTA CCGTGAACCC
CTCGACACCT TTGCCGCCAA TGTCATGGGC ACGGCCAACA TACTCGAGGC CTGCCGGCTG
ACAAAATCCG TGCGGGCCGT GGTGATCGTG ACCAGTGACA AGTGCTACCA GAACAATGAA
TGGGAATGGG GATACCGGGA GAGCGACCCC ATGGGCGGCC ATGACCCTTA CAGCGCCTCC
AAGGGGTGCG CGGAACTTGT CACCGCCGCT TTCCGGAATT CTTTTTTTTC TACAGGCACC
GGCCATCCGG CCCTGATGGC CACGGCCCGG GCCGGTAATG TGATCGGCGG CGGCGACTGG
GCCGAAGACC GCCTGATTCC GGACGTGGCC CGTGCTTTCA ACAAAAAAGA AACCATGAAA
ATCCGTAACC CCCATGGACT CCGTCCCTGG CAGCATGTGC TGGAGCCGCT TTCCGGATAC
CTGATGCTGG GACAACGCCT GATTGAAGGA GACCGGGGAC TTGCCGATGC CTGGAATTTT
GGGCCGTCGG AAGAAGACAC GCTTCCGGTA ATAACGCTTC TGAAACGGTT AAAAACTCAC
TGGTCCGACC TGGACTTTGA TGTGGACCAA CAGCCGGACC AGCCCCACGA GGCCGGTCTG
CTCCGGCTGG ACTCTTCTAA AGCCAGGCGG AAACTTGGCT GGCAACCGGT CTGGAACTGT
GACCAGGCCC TTGAAAGGAC CGCAGCCTGG TACCAGGCGT TTTACAACCA GGCTACGATT
CTGACCGGCG CGGATCTGGC GGCCTATATC GAGTCGGCCC GTTCAAAAGG ATTGCCATGG
GCGCAATAA
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| Protein sequence | MKNLFQNAYH RRRVLVTGHT GFKGSWLSFW LSQMGADVYG YSLAPETRPN HFSLLNPGDE
TPETDIRDIR QVIDCFQSFQ PEIVFHLAAQ SLVRRSYREP LDTFAANVMG TANILEACRL
TKSVRAVVIV TSDKCYQNNE WEWGYRESDP MGGHDPYSAS KGCAELVTAA FRNSFFSTGT
GHPALMATAR AGNVIGGGDW AEDRLIPDVA RAFNKKETMK IRNPHGLRPW QHVLEPLSGY
LMLGQRLIEG DRGLADAWNF GPSEEDTLPV ITLLKRLKTH WSDLDFDVDQ QPDQPHEAGL
LRLDSSKARR KLGWQPVWNC DQALERTAAW YQAFYNQATI LTGADLAAYI ESARSKGLPW
AQ
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