Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1953 |
Symbol | |
ID | 5694793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 2363496 |
End bp | 2366375 |
Gene Length | 2880 bp |
Protein Length | 959 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641264551 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001529834 |
Protein GI | 158521964 |
COG category | [R] General function prediction only |
COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.212606 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAGAA ACGGAACCAT AAGTGAATAT ATTCAGTCTC TTGTAGCTTC ACCGCGAATG GCCGGCGAGG TGGTTTACCA CACCGCGCTG GATCCGGTGC CGGCCCGGAT GGTTAGAAAG CCGGATTGGG GAGTGCCTGA GGCGGCCTGT CTTTCCGCCA TACTGGCCAC GGAAGGGCTG TATGCCCACC AGGCCGATGC CATTGGCCGG GTGTTGTCAG GAGAGAACGT GGTGGCGGCC ACGCCCACGG CCAGCGGCAA GACCCTGATC TATAATATTC CCGTGCTCCA GCGGCTGAAG GAAAATCCGT CGGCCCGGGC CCTTTATCTC TATCCGCTCA AGGCCCTGGC CAGGGACCAG TTGCGGGCAC TGCAGGAAAC CGCCGGCGCC GCGGGCATGG CGGAGGCCGT GTCCGCGGCC ATCTACGACG GTGACACCAC GGCCTGGCAC CGGAAAAAAA TCAGAGACAA CCCGCCCTCG GTGCTGATGA CCAATCCGGA CATGCTGCAC CTGGGGCTGC TGCCCTATCA TGAGACCTGG CATACTTTTT TTGCCAATCT TGCCTTTGTG GTCATTGACG AGATTCACAC CTACCGGGGC GTGATGGGGT CTCACATGGC CCACGTGTTC CGCCGTCTCT ATCGTGTCTG CACCCACCAC GGCGCCGCCC CCCTGTTCGT GGCCGGGTCG GCCACCATTG CCAACCCGGA AGAGCTGGCC GGCCAGCTCA CCGGCCGGCC GACAACGGCG GTCACAAAAA GCGGGGCCCC CAGGGGAAAA CGTCACGTGG TGTTCATGAA TCCGGTAACC GGTCCGGTGG CCACCACCAT TCAACTGCTT CGGGCCGCCC TGTACCGGGG GCTTCGCACC ATTGTCTACA CCCAGTCCCG GAAGCTGGCC GAGCTGATAT CCATCTGGGC GGAAAAGAAA AGCCCCCATG CCCATCAAAT CAGCTCCTAC CGGGCCGGGT TTCTGCCGGA CGAGCGCCGG GAGATCGAGC GAAAGCTTTC CGCCGGCGAA CTGCTGGCCG TGATATCCAC CAGCGCCCTG GAACTGGGCA TCGATATCGG AGACCTGGAC CTCTGCCTGC TGGTGGGGTA TCCGGGGTCA GTCATGGCTA CATGGCAACG CGGGGGCAGG GTGGGGCGGG CCGGCCAGGA GTCGGCCATG ATCCTGATTG CCGGGGAAGA CGCCCTGGAC CAGTATTTTA TGCGCAATCC CGGGGCCTTT CTGAGCCTGC CCCCGGAGGC GGCGGTGATT AACCCGGACA ACCCGGCCAT TGTTGAAAAG CACCTGGTAT GCGCCGCCGC CGAACACCGG TTGCGCGTGG ATGAGCCTTT TCTGCAGGGG GCGGCCATGC AGCGGGCCGT CGCGACGCTG GAGAAAAAAG GGGAGCTGTT GCGCAGCGCC GACGGGATGT ACCTGTTTGC GTCGCGAAAG CGGCCTCACC GGGAGGTCGA CCTGCGGGGC GCGGGCCGTA GCTTCAAGGT GATCTGCGAC CAGACCGGGG ACCACATCGG CGACATCGAC GGCATGCGGG TGTTCAGGGA CGCCCATCCC GGCGCGGTTT ATCTGCACAT GGGCCAGACC CACGTGGTAA AAAATCTGGA TGTCGGTGCC ATGCGCGTGA TTGTGTCCCG GCAGCCGGTC AATTACTACA CCAAGCCCCG GTCCACCAAG GACACCGAGA TTCTGGAAAC CTTTCAGACA AAACAGGTGG CCGGCATCAC GGTGTGCACG GGCCGCCTTC GCGTGACAGA AACCATCACC GGGTATGAGA AATGGCGGCT GTACGGAAAG CGGCGCGTGT CCGTGGAACC GCTGGACCTG CCGCCCCTTG TGTTTGAAAC GCAAGGGGTG TGGCTGGCCA TTCCCGACCG TATTCAGGAC GCGGCAGAGA GTGAATACCG GCACTTCATG GGCGGGATTC ACGCCATTGA GCATGCCGTC ATCGGCGTGC TGCCCATCTT TGTGATGTGC GACAGAAACG ACCTGGGCGG CATCTCCATG ACCTTTCATC CCCAGGTCGG CACCCCGGTC ATCTTTATCT ACGATGCCGT GGCCGGGGGT ATCGGCCTTA GCCGCCAGGC CTATGAAAAG GTGGCAGAGA TTCTCGGCTT TACCCGCAAC CTGATTTCCC AGTGTCCCTG CAAGACCGGG TGCCCCGCCT GTGTTCATTC GCCCAAGTGC GGCTCCGGCA ACCGGCCCAT TGACAAAGCC TGCGCCCTTT ACCTGCTGGA ACAGATGGCC CGGCCACCGG CAGCCGGTGC CCGGAGCCGG ACACGACGGG CCGCGGCCCC GGTTTTGCAA CCGGCCCGCA CCATACCGCC GCCGGTTCGC ACCGGAGATG TTCGGTTCGG CGTGTTCGAT ATCGAGACCC AGCGTTCTGC CGCAGAGGTG GGCGGCTGGC ACCGGGCCGA CCGCATGGGC ATCAGCTGCG TGGTGCTGTA CGATTCGGCC ACGGATACCT ATGACGCATT CCTGGAAAAC CAGGTGGCGG CGTTTATTCG CCGGCTTTCT GATTTTGATC TGGTGGTGGG GTTTAACAAC AAGCGGTTTG ACAACCAGGT CCTGGCGGGC TACAGCGACG CCGATCTTTC CCGGCTACCC ACCCTGGATA TTTTAGAGGA GGTGCACAAG ACCCTGGGCT ACCGGCTTTC CCTCGATTCA TTGGCAGAGA TCACCCTGGG CGCGAAAAAA AGCGCCAACG GGCTGCAGGC ACTGATCTGG TGGCAGCAGG GAGAGATCGA CAAGATCGTT GAGTATTGCA AAAAGGATGT TCAGATCACA AAAGACCTCT ACCTTTACGG CAAAATCAAC GGCTACCTGC TGTTTCGCAA CAAGGCCAAA CAGCAGGTTC GCCTGCCTGT AGACTGGTAA
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Protein sequence | MDRNGTISEY IQSLVASPRM AGEVVYHTAL DPVPARMVRK PDWGVPEAAC LSAILATEGL YAHQADAIGR VLSGENVVAA TPTASGKTLI YNIPVLQRLK ENPSARALYL YPLKALARDQ LRALQETAGA AGMAEAVSAA IYDGDTTAWH RKKIRDNPPS VLMTNPDMLH LGLLPYHETW HTFFANLAFV VIDEIHTYRG VMGSHMAHVF RRLYRVCTHH GAAPLFVAGS ATIANPEELA GQLTGRPTTA VTKSGAPRGK RHVVFMNPVT GPVATTIQLL RAALYRGLRT IVYTQSRKLA ELISIWAEKK SPHAHQISSY RAGFLPDERR EIERKLSAGE LLAVISTSAL ELGIDIGDLD LCLLVGYPGS VMATWQRGGR VGRAGQESAM ILIAGEDALD QYFMRNPGAF LSLPPEAAVI NPDNPAIVEK HLVCAAAEHR LRVDEPFLQG AAMQRAVATL EKKGELLRSA DGMYLFASRK RPHREVDLRG AGRSFKVICD QTGDHIGDID GMRVFRDAHP GAVYLHMGQT HVVKNLDVGA MRVIVSRQPV NYYTKPRSTK DTEILETFQT KQVAGITVCT GRLRVTETIT GYEKWRLYGK RRVSVEPLDL PPLVFETQGV WLAIPDRIQD AAESEYRHFM GGIHAIEHAV IGVLPIFVMC DRNDLGGISM TFHPQVGTPV IFIYDAVAGG IGLSRQAYEK VAEILGFTRN LISQCPCKTG CPACVHSPKC GSGNRPIDKA CALYLLEQMA RPPAAGARSR TRRAAAPVLQ PARTIPPPVR TGDVRFGVFD IETQRSAAEV GGWHRADRMG ISCVVLYDSA TDTYDAFLEN QVAAFIRRLS DFDLVVGFNN KRFDNQVLAG YSDADLSRLP TLDILEEVHK TLGYRLSLDS LAEITLGAKK SANGLQALIW WQQGEIDKIV EYCKKDVQIT KDLYLYGKIN GYLLFRNKAK QQVRLPVDW
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