| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1950 |
|---|
| Symbol | |
|---|
| ID | 5694790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 2360036 |
|---|
| End bp | 2361136 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641264548 |
|---|
| Product | prephenate dehydratase |
|---|
| Protein accession | YP_001529831 |
|---|
| Protein GI | 158521961 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0077] Prephenate dehydratase
[COG1605] Chorismate mutase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCTG AAAGCAGCGG CCAGGATGAA AAGATAGCGA ACCTGCGCCG GTCCATTGAT
GAAATTGATG ACACCATCCT GGACCTGCTC AACCGGCGGG TCTCTCTGGC CGAAGCGATC
GGGACGCTGA AGACGCAGAC CGGCAACCGG GTCATGGACA AGGCCAGGGA AGAATCGATC
CTGCAGCGGC TGGCCGGGCT CAACCCCGGC CCCTTGTCCT CTGAGATGCT GCGGCGGATA
TTTGTCGACA TCATTGCGGC CTCGCGTCAG GCCCAGGAAC CCAAGCGGAT CTCCTTTCTG
GGGCCGGAGG CCACCTTCAC CCATGTCGCG GCCCTGGCTT TTTTTAATGA GCTGGATACC
TTTGTCCCCC ACCCGAGTAT TCGGGACGTG TTTGATGACG TGGAAAAGGG GACCAGCCGG
TACGGCGTGG TGCCGGTGGA AAATTCCATT GAGGGCGCGG TCAACCACAC CCTTGATCTT
TTCCTGGAAT CCGAGCTTCA CATCTGCGCC GAGTCCTACC TGGCCATTTC CCATGACCTG
CTTTCAAAAA GCGGTGACCT GGAAAAGATT CATACCATCT ATTCCCACCC CCAGCCCTTT
GCCCAGTGCC GGACGTGGCT CAAGACCCAT CTGCCCCATG CCGAACTGGT GGAGTGCGGC
AGCACCTCCC AGGCGGCCCA GAAAGCCCTA CTGGCCGACG ATGCCGCGGC CATTGCCGGC
AGCGCCGCGG CCCGGCTGTA TGACCTGAAG GTGGCGGCGC CGGCCATTCA GGATGCCGTG
CGCAACACCA CCCGGTTTCT GGTCATCGGC CGGGACGCGC CCCGGCCCAC AGGCAACGAC
AAGACATCCA TCCTGTTTGT GACGGCCCAT ATTCCCGGGG CGCTGTTCAA GGCACTGGAG
CCCATTGCCG CGTCCGGCCT CAACATGCTT AAACTGGAGT CCCGGCCGGC CCGGCACAAG
AACTGGAGCT ACGTGTTTTT CGTGGACCTG GAGGGCCATG TCGAAAACGA GAAGGTGAAA
CAGTGCCTGG CAAAAATGGA GGCCTTCTGC CAGTTCATCA AAATCCTGGG CGCTTACCCG
GTAGCCCTGT CGGACGCATG A
|
|---|
| Protein sequence | MSAESSGQDE KIANLRRSID EIDDTILDLL NRRVSLAEAI GTLKTQTGNR VMDKAREESI
LQRLAGLNPG PLSSEMLRRI FVDIIAASRQ AQEPKRISFL GPEATFTHVA ALAFFNELDT
FVPHPSIRDV FDDVEKGTSR YGVVPVENSI EGAVNHTLDL FLESELHICA ESYLAISHDL
LSKSGDLEKI HTIYSHPQPF AQCRTWLKTH LPHAELVECG STSQAAQKAL LADDAAAIAG
SAAARLYDLK VAAPAIQDAV RNTTRFLVIG RDAPRPTGND KTSILFVTAH IPGALFKALE
PIAASGLNML KLESRPARHK NWSYVFFVDL EGHVENEKVK QCLAKMEAFC QFIKILGAYP
VALSDA
|
|---|
| |