Gene Dole_1942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1942 
Symbol 
ID5694782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2347844 
End bp2348605 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content52% 
IMG OID641264540 
ProductTetR family transcriptional regulator 
Protein accessionYP_001529823 
Protein GI158521953 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.338038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGAAA AAAACGACCT CAAGCCCCGT AAAAAACCGA TACAGGAAAG AGCCAAAGCG 
ACTGTGGATG CTATTTACGA GGCCGCTTTG CAACTGCTTT TAAAGAATCA CTATGACACC
GTGACAACCG ACCAGATAGC CGAACGGGCC GGGGTTTCCA TCGGCACGCT TTACCAGTAT
TTTCCCAACA AGGAGTCGAT TCTGGTCGGT ATGTGGGAGC AGGTGTTCAA TGCTGTTATT
ATCGGGGGGG CCACCTATTC TCTTCACAAG TCCGGAGTTG CAGGCGAGGT AAAAGCGCCG
GAACAACATG AACGTGTCGC CGGCGGGAAT CAGGGTGCCG CCGGGTATGT CATGAAGCAT
ATCGCCGGTG TGTACACCGG CGCGCTGTCA GGAATCAGCG AGGTCTCGAT TTTTTACCTT
CAACACCGGT TTAAGGTCCA GGGCACATGG AAGCTTGATC TCGGTGAGAC ATCGGTGAAG
ATTGTCATCA AGGGACTTCC GGTTGTTGAT CGAATCACCG GTGCGGGAAC CGTTGACCCC
CATACCGGTT TTATGGAAAT GGTCGTAAAA ACCCCGGTCA CGGGGAAGCT GCGAGGAACA
GGCAGGTTTG ACGGCGGTAA TTACGCTTTT CATATTCCCC GCGTTGATTA TTCAATGTCA
GGGACCTTGA CTGCGAACGG CTCTGCTTCA GGCAACTGGG AGTTTAATAT TTCGTTTATC
GTTTTCAGAC TGTCCGGGAA AGGTGATCTG TTCCCCGCTT AA
 
Protein sequence
MPEKNDLKPR KKPIQERAKA TVDAIYEAAL QLLLKNHYDT VTTDQIAERA GVSIGTLYQY 
FPNKESILVG MWEQVFNAVI IGGATYSLHK SGVAGEVKAP EQHERVAGGN QGAAGYVMKH
IAGVYTGALS GISEVSIFYL QHRFKVQGTW KLDLGETSVK IVIKGLPVVD RITGAGTVDP
HTGFMEMVVK TPVTGKLRGT GRFDGGNYAF HIPRVDYSMS GTLTANGSAS GNWEFNISFI
VFRLSGKGDL FPA