Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1942 |
Symbol | |
ID | 5694782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 2347844 |
End bp | 2348605 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641264540 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001529823 |
Protein GI | 158521953 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.338038 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGAAA AAAACGACCT CAAGCCCCGT AAAAAACCGA TACAGGAAAG AGCCAAAGCG ACTGTGGATG CTATTTACGA GGCCGCTTTG CAACTGCTTT TAAAGAATCA CTATGACACC GTGACAACCG ACCAGATAGC CGAACGGGCC GGGGTTTCCA TCGGCACGCT TTACCAGTAT TTTCCCAACA AGGAGTCGAT TCTGGTCGGT ATGTGGGAGC AGGTGTTCAA TGCTGTTATT ATCGGGGGGG CCACCTATTC TCTTCACAAG TCCGGAGTTG CAGGCGAGGT AAAAGCGCCG GAACAACATG AACGTGTCGC CGGCGGGAAT CAGGGTGCCG CCGGGTATGT CATGAAGCAT ATCGCCGGTG TGTACACCGG CGCGCTGTCA GGAATCAGCG AGGTCTCGAT TTTTTACCTT CAACACCGGT TTAAGGTCCA GGGCACATGG AAGCTTGATC TCGGTGAGAC ATCGGTGAAG ATTGTCATCA AGGGACTTCC GGTTGTTGAT CGAATCACCG GTGCGGGAAC CGTTGACCCC CATACCGGTT TTATGGAAAT GGTCGTAAAA ACCCCGGTCA CGGGGAAGCT GCGAGGAACA GGCAGGTTTG ACGGCGGTAA TTACGCTTTT CATATTCCCC GCGTTGATTA TTCAATGTCA GGGACCTTGA CTGCGAACGG CTCTGCTTCA GGCAACTGGG AGTTTAATAT TTCGTTTATC GTTTTCAGAC TGTCCGGGAA AGGTGATCTG TTCCCCGCTT AA
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Protein sequence | MPEKNDLKPR KKPIQERAKA TVDAIYEAAL QLLLKNHYDT VTTDQIAERA GVSIGTLYQY FPNKESILVG MWEQVFNAVI IGGATYSLHK SGVAGEVKAP EQHERVAGGN QGAAGYVMKH IAGVYTGALS GISEVSIFYL QHRFKVQGTW KLDLGETSVK IVIKGLPVVD RITGAGTVDP HTGFMEMVVK TPVTGKLRGT GRFDGGNYAF HIPRVDYSMS GTLTANGSAS GNWEFNISFI VFRLSGKGDL FPA
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