Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1906 |
Symbol | |
ID | 5694746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 2309027 |
End bp | 2309839 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641264504 |
Product | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase |
Protein accession | YP_001529787 |
Protein GI | 158521917 |
COG category | [R] General function prediction only |
COG ID | [COG0388] Predicted amidohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000594774 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCCAA AAACCATACG GGCCGGGGTG GTGCAGTTTG ACACCCGCCT CGGCGATATT GAGGTCAACC TGAAAAGCGC GCTTGACGGC ATTGCCGGCC TGGCCGCGCA AGGGGCCGAC CTTGCCGTGC TGCCGGAACT GTGGCCCTGC GGGTTTGACA ACCGCCACCT GGCGGCCCAT GCCGCCCAAA CCCCCCGGAT TCTGGAGATT GTTTCGGCTC AGGCCGCGGA ACATAGCATG GTGATCGCCG GTTCCGTGCC GGAGGCCGGG CCTGACGGCA TCTGCAACAC CCTGGTGGTG ATGGACAGGG ACGGCCGGGA AGCCGGCCGG TACCGGAAAA TCCATCTTTT TTCCGCTGGC GGTGAAGAGC GCTTTTTTGC AAAAGGCAAG GCCTGGGCCG TGTGCGATAC CGCCGCGGGA AAACTGGGCC TGATGATCTG TTACGATCTT CGGTTTCCCG AACTGTGCCG GGTCCTGGCC TTAGACGGCG CCGCGTGCGT CATCGTACCG GCCCAGTGGC CAGAAGCCCG GATTGACCAC TGGAACGCGT TGCTGAAAGC CAGGGCCATT GAAAACCAGT TGTTTGTGGT GGGGGCCAAC CGGTGCGGCC ATGATCCATC CCTGGCCTAT GGCGGCGGCT CCCAGGTGGT CTCTCCGACA GGAGAGGTGC TGGCCCTTGC TCGGGCGGAC GCGCCGCAGG TTATTCTGGC GAACCTGGAC CGGGCCGTGA TGGAAAATTT CAGAAAGCAC ATACCGTGTC TTCAGGAGCG GGCGCCGGAA AGCTATCAAA CCGGGCCAAA GGGAAAATCA TGA
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Protein sequence | MTPKTIRAGV VQFDTRLGDI EVNLKSALDG IAGLAAQGAD LAVLPELWPC GFDNRHLAAH AAQTPRILEI VSAQAAEHSM VIAGSVPEAG PDGICNTLVV MDRDGREAGR YRKIHLFSAG GEERFFAKGK AWAVCDTAAG KLGLMICYDL RFPELCRVLA LDGAACVIVP AQWPEARIDH WNALLKARAI ENQLFVVGAN RCGHDPSLAY GGGSQVVSPT GEVLALARAD APQVILANLD RAVMENFRKH IPCLQERAPE SYQTGPKGKS
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