Gene Dole_1906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1906 
Symbol 
ID5694746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2309027 
End bp2309839 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content62% 
IMG OID641264504 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_001529787 
Protein GI158521917 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000594774 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCCAA AAACCATACG GGCCGGGGTG GTGCAGTTTG ACACCCGCCT CGGCGATATT 
GAGGTCAACC TGAAAAGCGC GCTTGACGGC ATTGCCGGCC TGGCCGCGCA AGGGGCCGAC
CTTGCCGTGC TGCCGGAACT GTGGCCCTGC GGGTTTGACA ACCGCCACCT GGCGGCCCAT
GCCGCCCAAA CCCCCCGGAT TCTGGAGATT GTTTCGGCTC AGGCCGCGGA ACATAGCATG
GTGATCGCCG GTTCCGTGCC GGAGGCCGGG CCTGACGGCA TCTGCAACAC CCTGGTGGTG
ATGGACAGGG ACGGCCGGGA AGCCGGCCGG TACCGGAAAA TCCATCTTTT TTCCGCTGGC
GGTGAAGAGC GCTTTTTTGC AAAAGGCAAG GCCTGGGCCG TGTGCGATAC CGCCGCGGGA
AAACTGGGCC TGATGATCTG TTACGATCTT CGGTTTCCCG AACTGTGCCG GGTCCTGGCC
TTAGACGGCG CCGCGTGCGT CATCGTACCG GCCCAGTGGC CAGAAGCCCG GATTGACCAC
TGGAACGCGT TGCTGAAAGC CAGGGCCATT GAAAACCAGT TGTTTGTGGT GGGGGCCAAC
CGGTGCGGCC ATGATCCATC CCTGGCCTAT GGCGGCGGCT CCCAGGTGGT CTCTCCGACA
GGAGAGGTGC TGGCCCTTGC TCGGGCGGAC GCGCCGCAGG TTATTCTGGC GAACCTGGAC
CGGGCCGTGA TGGAAAATTT CAGAAAGCAC ATACCGTGTC TTCAGGAGCG GGCGCCGGAA
AGCTATCAAA CCGGGCCAAA GGGAAAATCA TGA
 
Protein sequence
MTPKTIRAGV VQFDTRLGDI EVNLKSALDG IAGLAAQGAD LAVLPELWPC GFDNRHLAAH 
AAQTPRILEI VSAQAAEHSM VIAGSVPEAG PDGICNTLVV MDRDGREAGR YRKIHLFSAG
GEERFFAKGK AWAVCDTAAG KLGLMICYDL RFPELCRVLA LDGAACVIVP AQWPEARIDH
WNALLKARAI ENQLFVVGAN RCGHDPSLAY GGGSQVVSPT GEVLALARAD APQVILANLD
RAVMENFRKH IPCLQERAPE SYQTGPKGKS