Gene Dole_1902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1902 
Symbol 
ID5694742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2306602 
End bp2307015 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content42% 
IMG OID641264500 
Producthypothetical protein 
Protein accessionYP_001529783 
Protein GI158521913 
COG category[R] General function prediction only 
COG ID[COG4113] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00660694 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAACGT TCTTTGATTC TTCAGCATTT GCGAAAAGAT ATATTGAGGA AAAAGGAAGT 
CAACTTGTTG ACGACATTTG TTATAAAGCG ACAGAGATAT GCCTCAGTGT TATCTGTGTC
CCTGAGATAA TATCCGCTCT GAATCGTCGA CTTCGGGAAA AATGTCTTTC TCACCAGGAT
TACATTACTA TTAAACAGCA CTTATCAGGT GATGTTCGGG ATGCTGTAAT AATTAATCTG
ACACCAGAAG TAATAAGAAT GTCGACTGAA CTTCTTGAAT CCTCACCGCT TCGGGCAATG
GATGCCATTC ACGTAGCGTG TGCTTTAGCT TGGAAAGCTG AGTTGTTTGT ATCATCAGAC
AACCGACAGC TTTCGGCGGC GAAGAAGGCC GGATTGAAGA TAAAACCTGT TTAG
 
Protein sequence
MKTFFDSSAF AKRYIEEKGS QLVDDICYKA TEICLSVICV PEIISALNRR LREKCLSHQD 
YITIKQHLSG DVRDAVIINL TPEVIRMSTE LLESSPLRAM DAIHVACALA WKAELFVSSD
NRQLSAAKKA GLKIKPV