| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1850 |
|---|
| Symbol | |
|---|
| ID | 5694690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 2237185 |
|---|
| End bp | 2238198 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641264448 |
|---|
| Product | 3-oxoacyl-(acyl-carrier-protein) synthase III |
|---|
| Protein accession | YP_001529731 |
|---|
| Protein GI | 158521861 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
|---|
| TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGAA CCTTGATTCG CGGTACAGGG CGGTATGTTC CGGAGCGGCT GGTGACCAAC
GATGAGCTTT CAAAAAAAAT GGAGACGTCC GACGAATGGA TCCGTCAGCG CACCGGTATA
GAGCAGCGCT ACTGGGTGCC TGAAGGCGGT GAGACCGGGG CCTCCGACCT GGGCCTGGAA
GCCTCAAAAA TCGCCCTGGA ACGGGCCGGC TGGACACCGG AGGATCTGGA TTTTATCATT
TTTGCCACAT TGAGCCCGGA CATCTTTTTC CCGGGATCAG GGTGCCTGTT GCAGCACAAG
CTGGGCCTCT CTTCCACCCC GGCCTTAGAC ATCCGCCAGC AGTGCACGGG CTTTATATAC
GGCCTGGCCA CCGCTGACGC CTATATTCGC AGCGGCATGG CCCGCCGGGT GCTGGTGGTG
GGGTCCGAGG TCCACAGTAC CGGCCTGGAT GTAACCACCC GGGGCAGGGA CGTGGCCGTT
ATTTTCGGCG ACGGCGCCGC CGCCGTATGC CTGGAAGCAG TGGAAACCGA AGAGCCGGTG
GGGGTGCTGG CATCGCTTCT TTTCGCCGAA GGAAAACACG CGGCCAGCCT GATGCTGGAG
GCCCCTGCCT CGCGCATGTC ACCGGAGCGC ATCACCCACG AGATGCTGGA TGAAGGCCGC
CACTATCCCA AGATGAACGG CAAGCTGATT TTCAAGCTGG CGGTGACGCG TCTGCCGGAA
CTGACCCTTC AGATCATGGA AAAGGCAGGG CTCACCTCTT TTGATGAAAT CGACCTGATT
ATTCCGCACC AGGCCAATCT TCGCATCAAC CAGTTTTACC AGGAGACACT GAAGCTTCCG
GAGGGCAAGA TCTACAACAA CATTCAGAAA TACGGCAACA CCACGGCCGC CACCATTCCC
CTGGCCTTAG ACGAGGTGAT TGAGCAGGGC CGGTTCAAAA AGGGCGATAC CGCCCTGTTC
CTGGGCCTTG GCGCGGGCGT GACCTGGGGC GCCAACCTTT ACCGGCACGC GTAA
|
|---|
| Protein sequence | MIRTLIRGTG RYVPERLVTN DELSKKMETS DEWIRQRTGI EQRYWVPEGG ETGASDLGLE
ASKIALERAG WTPEDLDFII FATLSPDIFF PGSGCLLQHK LGLSSTPALD IRQQCTGFIY
GLATADAYIR SGMARRVLVV GSEVHSTGLD VTTRGRDVAV IFGDGAAAVC LEAVETEEPV
GVLASLLFAE GKHAASLMLE APASRMSPER ITHEMLDEGR HYPKMNGKLI FKLAVTRLPE
LTLQIMEKAG LTSFDEIDLI IPHQANLRIN QFYQETLKLP EGKIYNNIQK YGNTTAATIP
LALDEVIEQG RFKKGDTALF LGLGAGVTWG ANLYRHA
|
|---|
| |