Gene Dole_1820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1820 
Symbol 
ID5694660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2201098 
End bp2201661 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content55% 
IMG OID641264418 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_001529701 
Protein GI158521831 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGACG AATTTTTTGT CCATGAATCC AGCTATGTGG ATGACGGGGC CGCCATCGGC 
GACGGCACCC GCGTCTGGCA TTTCTGCCAC ATCATGGCCG GTACCCGCAT CGGTACTAAT
TGTAATATCG GTCAGAACGT GGTCATCGGC CCGGATGTCG TCATCGGCAA CCAGTGCAAA
ATCCAGAACA ATGTTTCCGT ATACAAGGGT GTAACCCTGG AAGATGGTGT CTTCTGCGGG
CCGTCCATGG TATTCACCAA CATCTACAAC CCCCGGGCCG AAATCCGCAA GATGGACCAG
GTGCGGCCCA CTCTGGTCAA ACACGGCGCC ACCCTTGGCG CCAACTGCAC CATTGTCTGC
GGGATCACAA TAGGAAAGTA TGCCTTTATC GGCGCCGGAG CCGTGGTCAA TAAAGATGTC
CTGGATCACG CCCTGGTGGT CGGCAACCCG GCCCGACAGA TCGGATGGGT GTGTCTTTGT
GGAGAAAGAC TGACCGCTGG CCTGACATGC CCTACCTGCA ATAGTGAATA TCGTGAAACC
GGCCATGGCC TGGAAAAGAA ATAA
 
Protein sequence
MSDEFFVHES SYVDDGAAIG DGTRVWHFCH IMAGTRIGTN CNIGQNVVIG PDVVIGNQCK 
IQNNVSVYKG VTLEDGVFCG PSMVFTNIYN PRAEIRKMDQ VRPTLVKHGA TLGANCTIVC
GITIGKYAFI GAGAVVNKDV LDHALVVGNP ARQIGWVCLC GERLTAGLTC PTCNSEYRET
GHGLEKK