| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1810 |
|---|
| Symbol | |
|---|
| ID | 5694650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 2192308 |
|---|
| End bp | 2193840 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641264408 |
|---|
| Product | undecaprenyl-phosphate galactose phosphotransferase |
|---|
| Protein accession | YP_001529691 |
|---|
| Protein GI | 158521821 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
|---|
| TIGRFAM ID | [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.179884 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAGAG AAAACAATCA GATATTGCAA CGAATTCATC AAGGCTGGGA CCTGGGATTG
ACGGTAGCGG CGTTTATCTC AGCCTATGGT ATCAAGCAGT ATCTGCTGCC TGAACCCTGG
AGAGGGTTAA GTAGGGAACC CAACTATTAC ACCCTGCTGC TGCTGTGCAT CATTATCTGG
TATGTGGTGT TCCGGTTCTC CGGTATTTAT CGTCCCTATC GCAGACGGCC TTTTTCTTCA
ATTTTTCTAA ATGTGTTACG AAGTGTGGCT GTTTGCGTGA TGCTGATGGT GGTGATGCTG
TTTCTCATAA AAGAGCAGAC CGTCAGCCGG ATTTTTCTGG GCCTGTTTGT GGGGCTGGAC
GTGACCCTGC TGGTGGGCAG CAAGTGGTTG CTTTACACTC TTTTGCAAAA CCTGCGTAAA
CGCGGATACA ACTTCCGCAA CGTTCTGATT GTGGGACGCG GACAAAGAGC CGAAGAAATT
TCCCGGTCTA TTGAGCAACA GCGAGGGGCC GGCTTCCGGG TGATGGGGTG TTTGTCGGCT
GGCGAAGGGG TGGATGACGA GGGAGGCGTC AAGCCGGATA ATGGTGAACA AAAGAGGCCG
GGGGGTGACG GGGGTGGAGG GCCGGAAGAT GGCGAGATAG GGCTGGGTCA TGCCGGCGGT
GTGTGTGTGC CTGTTATCGG CGATATTGCG GATATCGAGC GGCTTTTGAC CGAACATGTG
GTGGATGAAC TGGTGTTTGC CGAACCCCTG CGAAACATCC CAAACGCAGG CGAATATATC
CACACGGCCG AACAGATGGG TGTTTTGGTG CATATTATGC CGGAATGGGG GTTGCGACGC
CTGGGACTTA CACCACGGAT GGGAACCCTG CAAATAGAGG CACTTTTCGG CCTGCCCACA
CTGGTCCTGA ACACCACGCC GGATCATAAT CCGTTTATCG AATTGAAAAA TATATTCGAC
TTTATTGCCT CGGGCCTGGG CCTGCTGGCA TGCGCCCTGC CCTTTGGAAT AATTGCCATT
GCCATCAGGC TCTCTTCTTC CGGCCCGGTA TTTTATAAAC AGGAACGGGT GGGCCAGAAC
GGCCGGCGGT TTACGCTGTA TAAATTTCGC ACCATGATAG ACGGCGCGGA CCAAATACAA
ACAGATCTGC TGGACAAAAA CGAAAGCGAC GGGCCGGTAT TCAAGATACG CAACGATCCA
CGGGTAACAC CATGGGTGGG CGCCTTTTTA CGAAAGACCT CGCTGGACGA GTTGCCGCAG
TTGATTAATG TGTTTGTGGG GCACATGAGC CTGGTGGGGC CCCGCCCGCC CCTGCCGGAA
GAGATAGTAA AGTACGGCAA AGATCAGCGG CGGCGGCTGT CCATGAAGCC GGGCATTACC
TGCCTGTGGC AGATAACGCC GCGGCGGAAT GACTTGAGCT TTAAAGAGTG GATAAAGCTG
GACCTGGAGT ATATTGACAA CTGGTCGCTG TGGCTGGATT TTAAAATCCT GGCAAAGACG
GCCTGGGTGG TGGTCACCGG GCAGGGGCGG TGA
|
|---|
| Protein sequence | MLRENNQILQ RIHQGWDLGL TVAAFISAYG IKQYLLPEPW RGLSREPNYY TLLLLCIIIW
YVVFRFSGIY RPYRRRPFSS IFLNVLRSVA VCVMLMVVML FLIKEQTVSR IFLGLFVGLD
VTLLVGSKWL LYTLLQNLRK RGYNFRNVLI VGRGQRAEEI SRSIEQQRGA GFRVMGCLSA
GEGVDDEGGV KPDNGEQKRP GGDGGGGPED GEIGLGHAGG VCVPVIGDIA DIERLLTEHV
VDELVFAEPL RNIPNAGEYI HTAEQMGVLV HIMPEWGLRR LGLTPRMGTL QIEALFGLPT
LVLNTTPDHN PFIELKNIFD FIASGLGLLA CALPFGIIAI AIRLSSSGPV FYKQERVGQN
GRRFTLYKFR TMIDGADQIQ TDLLDKNESD GPVFKIRNDP RVTPWVGAFL RKTSLDELPQ
LINVFVGHMS LVGPRPPLPE EIVKYGKDQR RRLSMKPGIT CLWQITPRRN DLSFKEWIKL
DLEYIDNWSL WLDFKILAKT AWVVVTGQGR
|
|---|
| |