| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1749 |
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| Symbol | |
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| ID | 5694588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2099624 |
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| End bp | 2100979 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641264346 |
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| Product | MiaB-like tRNA modifying enzyme |
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| Protein accession | YP_001529630 |
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| Protein GI | 158521760 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000349639 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGCT TTATCATTAA AACCCTGGGG TGCAAGGTTA ATCAATTTGA ATCCGAGGCC
ATTGCAGCGG CCCTGATCTC CGAAGGATGG TGTCTGGCCG ATGCCGGCGG CCCTGCTGAT
CTTTGCATTG TCAACACCTG CACCGTGACC TCCAGGGGCG CCATGCAGTC CCGCCAGCTG
CTCCGCCGGC TCCGGCGCGA ACACCCTTTT GCCATGGTCC TTGCCACGGG GTGCCATGCC
ACCCTGAACG CAGAGGAGCT GGCCGCCACC GGTGCGGTGG ACTGCATCGT GTACCACTGC
GCCAAGTACC GGATTCCTGA GACCGTCCGG TCCATGGAAG ACGCTTTTAC GCCTGGCGGC
CCTGTTCGCA TCGTGGACCA GGGGGAGCGC CGTGACCTGT TTACCCGGCT TTCCCCGGCG
GCGGTGACCG GGTTTCGGAC CCGGGCCTTT CTGCGCATCC AGGACGGGTG CAACGCTTTT
TGCGCCTACT GTATCGTGCC CCATGCCCGG GGCCCCAGCG TCAGCATGAC GCCGGACCGG
GTGATGGCAG CCCTTGCCGC GCTTGACGCG GACGGCCGCC GGGAGGTGGT GCTGGCCGGC
ATTCACCTGG GCCTTTACGG CGCCGATCTG TCGCCCTCGG TCTCCCTTCT GGAACTGCTT
ACAACCGTTG TCCGGCGCCG GCTCGTATCC CGGCTGCGGC TCAGCTCCAT TGAGCCGTGT
GAGCTCACCG ATGACCTGCT GGACCTGGCG GCCGGCACCG ACATGATCTG CGACCATTTT
CACCTGCCCC TGCAAAGCGG TTCCAACGAT GTGCTGGGCC GCATGGGCCG GCCCTACACC
GCTGAAGTTT ATGCCGACCG GGTGGCGGCG GTGCGAAAAC GGGTGCCCCA TGCCGCCATC
GGCGCGGATG TGCTGGTGGG GTTTCCCGGT GAAACCGCCG CCCTGTTTGA AGAGACCTTT
TGCCTGGTTG AAACCCTGCC GGTGAGCTAC CTGCATGTTT TTCCCTTTTC GTCCCGGCCC
GGCACCCGTG CCGCGGCCAT GGACAACCCG GTGCCGGCAG AAGAGATCAA GTCCCGTTGC
GCCCGGCTGC GGAATCTGGG GGCGGAAAAG AAACGGATTT TCTGTCAAAA TAATTACGAA
AGAATGGTGC CGGCCCTGGT GGAGGAGACG CCGGACCGCA AAACCGGCCT GCTCAAGGCG
GTTTCCACCA ATTACCTGTC TGTTCTGGTC AAGGGGCCGG AAGCGCTTCG GGGGCAACTG
GTGAATGTCC GGATCGGGGA GCAGGTGGAG GGGTTGCAGG TAAAAGGGGA AATCGCGACC
CCGGCGCGTG CGGCACGGGA AGAAGCCGAC AAATGA
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| Protein sequence | MKSFIIKTLG CKVNQFESEA IAAALISEGW CLADAGGPAD LCIVNTCTVT SRGAMQSRQL
LRRLRREHPF AMVLATGCHA TLNAEELAAT GAVDCIVYHC AKYRIPETVR SMEDAFTPGG
PVRIVDQGER RDLFTRLSPA AVTGFRTRAF LRIQDGCNAF CAYCIVPHAR GPSVSMTPDR
VMAALAALDA DGRREVVLAG IHLGLYGADL SPSVSLLELL TTVVRRRLVS RLRLSSIEPC
ELTDDLLDLA AGTDMICDHF HLPLQSGSND VLGRMGRPYT AEVYADRVAA VRKRVPHAAI
GADVLVGFPG ETAALFEETF CLVETLPVSY LHVFPFSSRP GTRAAAMDNP VPAEEIKSRC
ARLRNLGAEK KRIFCQNNYE RMVPALVEET PDRKTGLLKA VSTNYLSVLV KGPEALRGQL
VNVRIGEQVE GLQVKGEIAT PARAAREEAD K
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