| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1727 |
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| Symbol | |
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| ID | 5694565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2072973 |
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| End bp | 2073947 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641264323 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001529608 |
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| Protein GI | 158521738 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCCCA TTCGTGACTC AAACCCGTCC CGCACCGTTC CGGTGGTCAA TAACACCATC
ATCGGCATCT GCGTGGTGGT GTTTCTGATC GAACTGGGGC AGGGCAGTGG CTTTGACGAG
TTCCTTTATC TTTACGGGCT GGTGCCGGCC CGCTATTCCG TGCCGGAAAT GGCCGCTTAC
TTTTCTTTTT TTCAGCAGGC GTTTTCTTTT CTCTCCTTTA TGTTTCTGCA CGGCGGGTTC
TGGCACATCC TGTTCAACAT GTGGGTCCTC TATATTTTCG GCGACAATAT TGAGGACCGG
CTGGGCCATG GCCGGTACGC GGCTTTCTAC CTGCTCTGCG GCCTGGCATC CGGCCTGGCC
CACATGATTC CCAACATTCA GTCCACGGTT CCGGTGGTGG GAGCCAGCGG CGCCATCGCC
GGGGTGATGG GCGCCTATTT CATCCTCTAC CCCAGGGCAA AAGTGCTGAC CCTGGTGCCC
CTGTTGTTTA TTCCGCTGTT TTTTGAAATC CCGGCCTTTT TCTTTCTGGG GTTCTGGTTT
GTGATGCAGG TGTTAAGCGC GGCCGGTTCC TCCGGCGGTA TCGCCGGGGG CGGTGTGGCC
TGGTGGGCCC ACGTGGGCGG ATTTGTGGCC GGCATTGTGC TGCTCAGAAT GTTTAAGGTC
ATGCCGGCCC AGGCCCTTTC GGAGAGGCCG AAAAACATCA CTACAAGAAG AAAAAGTCCC
CGCATTCAGG TGATTCACCC CACCGGACCG GGCAACGAGC CCAACCTGTA CGGCGACATC
ACCATCACCA GCCTGGAAGG GGTGACCGGC GCCACCAAGA CCGTGAACAT TCCCTGGGGC
TTTCAATCCC GGCTCTACAA AGTGGCGGTA CCGCCGGGCA CAAAACCCGG CGCCACCCTC
CGGTTAAAAG GCCTGGGAAG GATCGCTTCC GACGGCACCA GAGGAGACCT GTTTTTAAAG
GTCAATTTCA TGTAA
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| Protein sequence | MLPIRDSNPS RTVPVVNNTI IGICVVVFLI ELGQGSGFDE FLYLYGLVPA RYSVPEMAAY
FSFFQQAFSF LSFMFLHGGF WHILFNMWVL YIFGDNIEDR LGHGRYAAFY LLCGLASGLA
HMIPNIQSTV PVVGASGAIA GVMGAYFILY PRAKVLTLVP LLFIPLFFEI PAFFFLGFWF
VMQVLSAAGS SGGIAGGGVA WWAHVGGFVA GIVLLRMFKV MPAQALSERP KNITTRRKSP
RIQVIHPTGP GNEPNLYGDI TITSLEGVTG ATKTVNIPWG FQSRLYKVAV PPGTKPGATL
RLKGLGRIAS DGTRGDLFLK VNFM
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