| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1712 |
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| Symbol | |
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| ID | 5694550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 2054972 |
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| End bp | 2057080 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641264308 |
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| Product | glycyl-tRNA synthetase, beta subunit |
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| Protein accession | YP_001529593 |
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| Protein GI | 158521723 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00327927 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACG ATACACTGCT GTTTGAGATC GGAACAGAAG AGCTTCCCGC CGGCTATATT
GAGCCGGCCC TGGCAGCCCT TGCCAACACT CTGGTCCGCA AGCTTACCGA GGCACGGGTG
GCCTGCGGCA CGGCCAGAAC ATTCGGCACG CCCCGGCGGC TGGCCGTGAT CATAGAGGAT
GTGGCTGGAA AACAGGAGAC CGTTACCACG GAGCTGACAG GGCCGCCCAG AAGCGTGGGC
ATGGACGAAA ACGGCCGGTT TACCCTGGCG GCTAAAAAGT TTGCCGAAAA AGCCGGTGTG
GCATTAAAGG CGGTTAAAGT TGTCCGCACG GAAAAAGGGG AGTACCTGGC GGCCAGAAAG
GTGGAAAAGG GCGTGCTCAC CAGCCGTATC TTAAAAACCG TTCTGCCCCA GGTTATCACG
TCCCTGCCGT TTCCCAAGAC CATGAAATGG GCGGACCGCA ACGAAACCTT TGCCCGGCCG
GTGCACTCCC TGACCGTTCT TCTGGGCAAA TCGGTGGTAC GATTGTCATG GGCCGGCATT
TCCAGCAACC GGAACTGCAT GGGGCACTCT TTTATGCATC CAGCGCCGGT ATCGATTTCC
CATCCGGACG CCTATGTGGA GCAGATGCGG CGCCACTTTG TGCTGGTGGA CACGGCTGAG
CGAAAGGCCG CGGTCCGCCG TGAAATCGGA CAGGCCGCCA TTGCGCTGGG CGGGGAACTG
CTGCCGGATG AAGAACTGGT GGACGTGGTC ACCAATCTGG TGGAATACCC CGTGGCATCA
GCGGGGCGGT TTGACGAAAA ATTTCTTGCT CTCCCAAAAG AGGTACTGAT CACTTCCATG
CGGTCCCATC AGAAATATTT TGCCGTGACC GACAAAAAGA AAAACCTGAT GCCCTGTTTT
GTGGCGGTGA ACAATACAAA GGTATCGGAC ATCGACGTGG TGACCACCGG CCATCAGCGG
GTGCTGCGGG CCCGGCTGGA AGACGCCATG TTCTTTTACC AGAAAGACCT TCAGGCACCG
CTTGACCAGC GGGTGCCGGA CCTGGCCCGG GTGGTATTCC AGGCCCGGCT GGGAACCCTG
CTTGAAAAAA CGCAGCGCAT TGAGCAGCTG GGCCTGATGC TGGCCGGTCA GGCCGATCCC
GGCAATACCG CAACCGGACA GACTGTGGTG CGGGCCGCCA CCCTGTGCAA GGCAGACCTG
GTCACCCACA CGGTGATCGA GTTTCCCAAG CTCCAGGGGG TGATGGGACG GGTTTTTGCC
CGGGCTTCAG GAGAACCGGA AGCGGTGGCC CGGGCCATTG AAGAGCATTA CCAACCCCTG
TACGCCGGCG CCGACCTGCC CGAAAGTCTG GCCGGGGCCT TACTGGCCGT TGCCGACAAA
ATTGACTCCA TCTGCGGATG TTTTGCCGTG GGCCTGGTGC CCAGCGGCGC CTCAGATCCT
TACGCCCTGC GCCGCCAGGG AATTGGCTTG ATCCAGATTC TTCTGTCCCA CAACATCGGG
GCCTCCCTTT CCCGAATCAT TCAGGCGGCC ATGGCGCCTT TTGCGTCCGT GTCCACCGAA
CCGGTTCAGG CGGCGGCCGA CGGCGTGTCC TTGTTTCTTC GGGGCCGTAT GGCTCAGATG
CTGGTGGACG ACGGTGTTCC CAGGGACGTT GCCACGGCGG TGCTCAACGC CTCGGCGGAC
CATGTACCGG ATGCCTGGAA ACGGTCCAGA GCACTGGCCG CGGTAAAGCC GTTGCCTGAT
TTTGAACCCA TTGCTGCCGC ATTTAAACGG GTGGCCAACA TTATCAAAAA AGCCGATCCC
AAAGAGATCG CCGGAGAGGT GAACAGTGAC CTTTTCGAAG CGCCTGCCGA ATCCACGCTG
CTTGACGCCT GCCAGGCGGT AAAGATAAAA ATGGACGATG CTCTGGCCCG GCAGGACTAT
TCCCGGGCCT TGACCGAAAT TGCGGACCTG AGAAGCGTCG TGGACACCTT TTTTGACGAA
GTGCTGGTAA TGGCAAAAGA TTCGGGCCGG CGGCGCAACC GGCTGGCCCT GCTGTCTCGC
GTCAACTCCC TTTTCAAGGG ATTTGCCGAT TTTTCCGCGC TCTCCACGGA GCAGGCGACC
GGCCGATAA
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| Protein sequence | MKNDTLLFEI GTEELPAGYI EPALAALANT LVRKLTEARV ACGTARTFGT PRRLAVIIED
VAGKQETVTT ELTGPPRSVG MDENGRFTLA AKKFAEKAGV ALKAVKVVRT EKGEYLAARK
VEKGVLTSRI LKTVLPQVIT SLPFPKTMKW ADRNETFARP VHSLTVLLGK SVVRLSWAGI
SSNRNCMGHS FMHPAPVSIS HPDAYVEQMR RHFVLVDTAE RKAAVRREIG QAAIALGGEL
LPDEELVDVV TNLVEYPVAS AGRFDEKFLA LPKEVLITSM RSHQKYFAVT DKKKNLMPCF
VAVNNTKVSD IDVVTTGHQR VLRARLEDAM FFYQKDLQAP LDQRVPDLAR VVFQARLGTL
LEKTQRIEQL GLMLAGQADP GNTATGQTVV RAATLCKADL VTHTVIEFPK LQGVMGRVFA
RASGEPEAVA RAIEEHYQPL YAGADLPESL AGALLAVADK IDSICGCFAV GLVPSGASDP
YALRRQGIGL IQILLSHNIG ASLSRIIQAA MAPFASVSTE PVQAAADGVS LFLRGRMAQM
LVDDGVPRDV ATAVLNASAD HVPDAWKRSR ALAAVKPLPD FEPIAAAFKR VANIIKKADP
KEIAGEVNSD LFEAPAESTL LDACQAVKIK MDDALARQDY SRALTEIADL RSVVDTFFDE
VLVMAKDSGR RRNRLALLSR VNSLFKGFAD FSALSTEQAT GR
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