| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1661 |
|---|
| Symbol | |
|---|
| ID | 5694498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 1976451 |
|---|
| End bp | 1977209 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641264256 |
|---|
| Product | hemolysin A |
|---|
| Protein accession | YP_001529542 |
|---|
| Protein GI | 158521672 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1189] Predicted rRNA methylase |
|---|
| TIGRFAM ID | [TIGR00478] hemolysin TlyA family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0132682 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCCTG TAGTTAAAAA ACGGCTGGAC CAGCTGCTGG TGGAAAAGGG CCTGGCCCCC
ACCCGGCAGA AGGCCCAGGC CATGATCATG GCCGGCGCCG TGCTGGTGGA TGACCACCCC
GCGGACAAGG CCGGCGTTCA GGTGCCGGTG ACCGCCGCCA TCGTCACCCG GGACGCCTGC
CCCTACGTCA GCCGGGGTGG CCTGAAGCTG GAAGGCGGGC TGGACGCGTT TGGCCTGGAT
GTCACCGGCA AGGTCTGTCT TGATGTGGGG GCCTCCACCG GCGGGTTTAC CGACTGCCTG
CTGACCCGGG GAGCCCGCCG AGTGTTTGCC GTGGACGTGG GCTACGGCCA GCTGGCCTGG
AAGCTGCGCC AGGACCCCCG GGTGGTTGTC ATCGAGCGCA CCAACATTCG GCACATGGCC
GCCGACGCCC TGCCCTGCCC GGTCGACCTG GTGACCATTG ACGCCTCTTT TATCTCCCTG
AAAATTGTGA TGCCGGCGGT CGTCGGCTTC ATGAAGCCCG AAGCCGTGAT CCTGGCCCTT
ATCAAGCCCC AGTTTGAAGT GGGCAAGGGC AAGGTGGGAA AAGGCGGCGT GGTGCGTGAC
CCGGGCCAGC ACCGGGAGGT GCTCGACGAC CTTTGCCGAT GGGCCAAAAC CCAGGGACTC
TGGTGCGCGG ACGCGGTGGT TTCCCCCATC ACCGGACCCA AGGGAAACGT GGAATTTTTT
AACCTGTTTG GCCTTGATTT TTCTAAAAAT ACAAGATAG
|
|---|
| Protein sequence | MSPVVKKRLD QLLVEKGLAP TRQKAQAMIM AGAVLVDDHP ADKAGVQVPV TAAIVTRDAC
PYVSRGGLKL EGGLDAFGLD VTGKVCLDVG ASTGGFTDCL LTRGARRVFA VDVGYGQLAW
KLRQDPRVVV IERTNIRHMA ADALPCPVDL VTIDASFISL KIVMPAVVGF MKPEAVILAL
IKPQFEVGKG KVGKGGVVRD PGQHREVLDD LCRWAKTQGL WCADAVVSPI TGPKGNVEFF
NLFGLDFSKN TR
|
|---|
| |