| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1658 |
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| Symbol | |
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| ID | 5694495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 1971698 |
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| End bp | 1972531 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641264253 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_001529539 |
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| Protein GI | 158521669 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | [TIGR03028] polysaccharide export protein EpsE |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00056738 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGGGAT ATTCGCTACC GGCCCTACCC TGCCGGGGTC CGCTTGTCAT CTCGGTGTTG
GACCTTCTGC TGTTTGCGCC CATGGGCACA TGCGAAAACT ACATTGTCGG TCCTGGAGAC
ACGCTGAGCA TCAATGTATA CGAACATCCG GATCTGACCA CAACGGTGCA GGTGGATGGT
GGCGGGGCGA TTCGGTTTCC CCTGATCGGC GAGTTCGAGG TCACCGGCAT GGATGTCTCC
GAACTCTCCC AGGCCATTGA AAAAAAGCTG GCAGACGGAT ACATCGTCAA TCCCCAGGTG
GCCATTGTTG TAAAAGAGTA TCGCAGCCGC AAGGCCACCA TTCTCGGCCA GGTCAATGCA
CCGGCCCTCT ACGAACTCAG GGGCCGCACC ACCCTGCTGG AGCTGATCTC CACTGCCGGC
GGCCTCACCG CCGATGCCGG CAAATACGCC TATCTCACTC GCACACTCTC GGAAAACGGC
GAGAGAGACG CGCCGCGGCA GGAAGTGATC AAGATCGACA TAAAAAAGCT GGTGGAAGAG
GGCGACACCA CCCAGAATAT TCTCATCAGT AATGGTGACA GTGTTTTCAT CTCCCGTATG
GAAAAAATTT ATGTAACCGG CGAGGTCAAG TACGCCGGGG CCTACCCCTA CGAAGAGGGA
CTCACCGTGA TCAAGGCCAT CACCAATGCC AGAGGGTTTA CGGACAGGGC ATCGGCCACC
AACATTCAGA TCATTCGAAA AGAAAATGGT ATTGAACAGG TGTTGAGCAA AGTGAAAATG
GACGAGCGGG TTATGCCGGA AGATGTGATC GTGGTACCGG AAAGCTTTTT CTAA
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| Protein sequence | MWGYSLPALP CRGPLVISVL DLLLFAPMGT CENYIVGPGD TLSINVYEHP DLTTTVQVDG
GGAIRFPLIG EFEVTGMDVS ELSQAIEKKL ADGYIVNPQV AIVVKEYRSR KATILGQVNA
PALYELRGRT TLLELISTAG GLTADAGKYA YLTRTLSENG ERDAPRQEVI KIDIKKLVEE
GDTTQNILIS NGDSVFISRM EKIYVTGEVK YAGAYPYEEG LTVIKAITNA RGFTDRASAT
NIQIIRKENG IEQVLSKVKM DERVMPEDVI VVPESFF
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