Gene Dole_1605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1605 
Symbol 
ID5694442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1907526 
End bp1909106 
Gene Length1581 bp 
Protein Length526 aa 
Translation table11 
GC content55% 
IMG OID641264200 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_001529486 
Protein GI158521616 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACACCT TAGGCGACAT CTCAACCAAC GGCGCGGTTC ATTTTCCGGA CTGGGAGGCG 
ATCGTTTTTG AAGAAACCCG CATGACCTAT CGGCAACTCA ATACCCGGGT CAACCGCCTG
GCCAATGCCC TGACGGCGCT GGGGTGCAAA AAAGGGGATC ACCTGGCGGT CCTGGCGGAA
AACTGCAGCC AGTACGTGGA AATCTATTTT GCCGCAGCCA AGATCGGGGC CTGTGTCTGC
CCGCAGAACC ATCGTCTGGC CGATGAAGAG CTGACCTACG TCATCAACCA TGGTGAATCA
ACCCTGTTTC TGGTGGGGCA TGGATTTGAA GATCGGGCCT GTTCCATCCA GAGTGGTTTG
ACGAATATCA GGTACTGGAT ATCCATAGAA AACTTTATTG ACGGGTACCT TTCCTACGAA
GAACTGATAA AGACACACCC GGACACGGAA CCGGTGCCAG AGTCGCCGGT CGATGAACAG
GACCTGGCCA TTCTCATGTA CACCGGCGGC ACCACCGGTC TTCCCAAGGG GGTCATGCTG
ACCCACCGGA ACCTGATGAC CACCACCGCC AATGCCGTAC TCACGGCGGC CACTGCGCTG
GCCAACCTGG GGCCGGGCCG GCGGTTTTCC ACCTGCATGG TGCTACCCAT GTTTCATGTT
TCCCTGTGGC CGGTACTGTT GACACTTTCA ATTGGCGGTA AGGCTGTCAT CAACCGCAAG
ATGGATCTGG GCGAAATCCT GCGGCTGATT CAGGATGAAG AGTGCGCCCA TATCAATCTG
GTGCCGACCA TTTACGGCTG GCTGGTCGAT TATCCGGACG CCGATAAATA CGATATTTCC
AGCCTGATTT ACATGACCTA TGCCGGCAGC CCCTTTCCCA CGGAAGTTTT GAAAAAGTGC
ATTCGGCGGT TTGGCAATAT TTTTTCTCAA GGATATGGGG CCACCGAAAC CGCCGGCGGC
GCGGCAACGA TGTTAAGTTA TCAGGATCAC GAGATCGAGG GCTCCCGGTC ACGTTTACTG
GCCAGCGCCG GTAAAACCGC CCCCTGTTCC CGAATCAAGA TCGCCGACGA CGAGGGCCGT
GCCCTGCCGT ACGGGCAAAG CGGCGAAATA TGCGTCACCG GCAAACACAT CATGGCCGGC
TACTGGAAGG ATCCGGTGAA AACCGCCGAG GCCCTGCGAG ACGGATGGTA CCATACCGGC
GACATGGGCT ACATGGATGA AGATGGGTAT GTGTTTTTGA CCGACCGCAA AGCGGACATG
ATCATTTCCG GGGGAGAAAA CGTCTATCCC AAGGAGACCG AGGATGTCCT TTACCAGCAT
GAAGCCGTGG CGGAATGCTC TGTGGTCTCG GCTCCGGATC CCCGCTGGGG TGAAATCGTC
AAGGCGGTGG TGGTCCTGCA ACCAGGTAAA ACAGCGACTG AAGAAGAGTT GATTGCTTTC
TGCAAAGAGC GGCTGGCCGG GTATAAATGC CCCAAGTCGA TTGTCTTCTG GGACAATCTG
CCTACATCCA TCATCGGGAA AGTTTTAAAG AAGGAGATCA AGGCAACTTT CTGGCAGGGG
CAAGACAGGA AAATCGGATA A
 
Protein sequence
MYTLGDISTN GAVHFPDWEA IVFEETRMTY RQLNTRVNRL ANALTALGCK KGDHLAVLAE 
NCSQYVEIYF AAAKIGACVC PQNHRLADEE LTYVINHGES TLFLVGHGFE DRACSIQSGL
TNIRYWISIE NFIDGYLSYE ELIKTHPDTE PVPESPVDEQ DLAILMYTGG TTGLPKGVML
THRNLMTTTA NAVLTAATAL ANLGPGRRFS TCMVLPMFHV SLWPVLLTLS IGGKAVINRK
MDLGEILRLI QDEECAHINL VPTIYGWLVD YPDADKYDIS SLIYMTYAGS PFPTEVLKKC
IRRFGNIFSQ GYGATETAGG AATMLSYQDH EIEGSRSRLL ASAGKTAPCS RIKIADDEGR
ALPYGQSGEI CVTGKHIMAG YWKDPVKTAE ALRDGWYHTG DMGYMDEDGY VFLTDRKADM
IISGGENVYP KETEDVLYQH EAVAECSVVS APDPRWGEIV KAVVVLQPGK TATEEELIAF
CKERLAGYKC PKSIVFWDNL PTSIIGKVLK KEIKATFWQG QDRKIG