Gene Dole_1590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1590 
Symbol 
ID5694427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1892435 
End bp1893298 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content58% 
IMG OID641264185 
Productnitroreductase 
Protein accessionYP_001529471 
Protein GI158521601 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000230699 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATTG AACGATTAAC GGACCGGTGC AATAACTGCA TGCTGTGTGT TGAAGAGTGC 
ATTGCCGGTG TGTGGCGCGA GGTCAACGGC GTGCCCGAGC CGGTGTTTCC CCTGGCGTGC
AACCTGTGCA GCCACTGTGT GGCGGTTTGT CCCCGGCAGG CCATTGTTCA CTCCCGCCTG
GACCAGGGCC AGGTGGACAG GGTGCGACGA AAGCTTTTGG ACGCGGAAAC CTACAGGGAG
ATCACGGTCA CTCGGCGCAG CATCCGGCGC TACAAGGATT TGCCGGTGCC CCGCCAGGCC
ATCGAGAAGG TGCTTGATCT GGCCCGGTTC TCCCCCACGG CCAGCAACTC TCAGCACCTG
AGCTATATCG TGATCACCGA TCGCGCGATC ATTCAAAAGG CCGCGGACCG TGTGTTTGCC
ATGGGTGTCA AAGCCTACCG ATGGGCCACC TCCCGGCCCG GGAAAATGGT TCTCGGACTG
TTGAAAAAGA ACAAAAAAAT AGCTTCGCTG CAGCGCTATA TGGCTGCCAT GGATTATTAC
ATCGAACAGT CCGCCGCGGG CCGGGACTAT ATTCTTCACA ACGCGCCGGT GCTTATCCTT
GTGTGCGCGC CCAGGGGGGC AGATTTTGCC GTGGACAACT GCAACATCGC GGGTACCAAT
ATCATCAACT ATGCCCACAC GCTTGGCCTT GGCACCTGCT ATATCGGTTT TCTCACCCTG
CTGCTGCGGC GCGGTAAAAA GCTTCGTGCC CTGCTGCGGG TTCCCGAGAA CCGGCAGGTG
GGGGTCAGTC TGGTCATGGG ATACCCGGCC TATCGCCATT CGTTTGCGCC GGCTCGAAAA
AACCCTTGCG TAACATGGGT TTAG
 
Protein sequence
MRIERLTDRC NNCMLCVEEC IAGVWREVNG VPEPVFPLAC NLCSHCVAVC PRQAIVHSRL 
DQGQVDRVRR KLLDAETYRE ITVTRRSIRR YKDLPVPRQA IEKVLDLARF SPTASNSQHL
SYIVITDRAI IQKAADRVFA MGVKAYRWAT SRPGKMVLGL LKKNKKIASL QRYMAAMDYY
IEQSAAGRDY ILHNAPVLIL VCAPRGADFA VDNCNIAGTN IINYAHTLGL GTCYIGFLTL
LLRRGKKLRA LLRVPENRQV GVSLVMGYPA YRHSFAPARK NPCVTWV