| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1585 |
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| Symbol | |
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| ID | 5694422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 1887861 |
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| End bp | 1889276 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641264180 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_001529466 |
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| Protein GI | 158521596 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.953972 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACGGCG TTGATCAACC GGTGTCGCCG GTGCGAAAAG GCCAGGCCGT GGACCTGGAG
ATCGAAACCC TTGCCTTTGG AGGGCGGGGG CTGGCCCGTG TCGACGGGCT GGCCGTGTTC
GTGGACCATA CCCTGCCCGG GGACCGGGTG TCGGCCCGCA TCACCCGCAA AAAGTCCAAT
TTTGCCGAAG CCCGGCTTCT GGAGGTCCTT TCCCCCTCGC CGTTCCGTGT CCTGCCCCAA
TGCCCTTACT GCGGTCACTG CGGCGGCTGC CGTCTTCAGA TTCTCGACTA TGACAAACAG
CTTGACTGCA AGCACGAACA GGTGGCCGAC GCTCTGCGCC ACATCGGCCT GGTGGAAAAC
GTGCCGGTGC ATCCGGTGAT GCCCGCTGAC CCGGTGTGGG GCTATCGCAA CAAGATGGAG
TTCTCCTTTG CCGACCGCCG CTGGCTACTG CCCGAAGAGA TGGAGATGGA GAATATCGAT
ACCTCCTTTG CCCTGGGCCT TCATGTGCCG GGTACGTTTC ACAAGGTGAT CGATGTCGAC
GCCTGCCTGC TGCTGCCCGA ACCGGGCAAC GCGATTCTTG GTGACGTGCG GGCCTATGCC
AGGGCCTCCG GTGTTCCGGC ATACGGCCTG AAAAGCCACC AGGGATTCTG GCGGTTTTTA
ATGCTGCGCC ACTCCGTGGC CCATGACAAC TGGATGGTCA ATATCGTCAC CGCCGCCGAA
GACCGGCGCC TGTTGCAGCC CCTGGCCGAC CTGCTGGCAG ACCGATATCC CGAAGTGGTC
TCCGTGGTCA ACAACATCAC CGCCAGAAAG GCCGGGGTGG CCCAGGGCGA ATATGAGATT
CTGCTCCACG GCGCCCCTTT TATTTCAGAC CGGCTGGGCC GATTCTCCTT TGATATATCG
GCCAACTCTT TTTTTCAGAC CAACACGCGG GGGGCCGAGC GGCTCTACAC CGTGGCCAGG
GAATATGCCG GGCTGACCGG GAGCCAAACC GTGGTGGACC TTTACTGCGG CACCGGCACC
ATTGCCATCT GGCTGTCGGG TGCGGCAAAA GAGGTGATCG GCCTTGAAAT CAACGACAGC
TGCCTGGCCG ATGCCGTAAA TAACTGCCGG ACCAACAATG TCTCCAATGT CCGGTTTGTG
GCCGGAGACG TGAAGGAGAC CCTTCCCCGG CTGGACTGCC GGGCCGATGT GCTGGTCATT
GATCCGCCCC GGGCCGGCAT GCACAAGGAC GTTGTGGAGC AGGTCCTGGC CATGGCGCCG
CCGCGCATTG TTTATGTGTC GTGTAACCCC GCCACCCTGG CCAGGGACGT GGCCATGCTC
AGTGAAGCCT ATACCGTGGC CGAGGTCCAG CCGGTGGACA TGTTTCCCCA CACTCCCCAT
ATCGAGTGCG TGGCCCGGCT GGACAAGAAA GCATAA
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| Protein sequence | MNGVDQPVSP VRKGQAVDLE IETLAFGGRG LARVDGLAVF VDHTLPGDRV SARITRKKSN
FAEARLLEVL SPSPFRVLPQ CPYCGHCGGC RLQILDYDKQ LDCKHEQVAD ALRHIGLVEN
VPVHPVMPAD PVWGYRNKME FSFADRRWLL PEEMEMENID TSFALGLHVP GTFHKVIDVD
ACLLLPEPGN AILGDVRAYA RASGVPAYGL KSHQGFWRFL MLRHSVAHDN WMVNIVTAAE
DRRLLQPLAD LLADRYPEVV SVVNNITARK AGVAQGEYEI LLHGAPFISD RLGRFSFDIS
ANSFFQTNTR GAERLYTVAR EYAGLTGSQT VVDLYCGTGT IAIWLSGAAK EVIGLEINDS
CLADAVNNCR TNNVSNVRFV AGDVKETLPR LDCRADVLVI DPPRAGMHKD VVEQVLAMAP
PRIVYVSCNP ATLARDVAML SEAYTVAEVQ PVDMFPHTPH IECVARLDKK A
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