Gene Dole_1578 details

Gene Information

• Locus tag: Dole_1578
• ID: 5694415
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: -
• Start bp: 1878829
• End bp: 1880637
• Gene Length: 1809 bp
• Protein Length: 602 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 641264173
• Product: TPR repeat-containing serine/threonin protein kinase
• Protein accession: YP_001529459
• Protein GI: 158521589
• COG category: [K] Transcription; [L] Replication, recombination and repair; [R] General function prediction only; [T] Signal transduction mechanisms
• COG ID: [COG0515] Serine/threonine protein kinase; [COG4783] Putative Zn-dependent protease, contains TPR repeats

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0000000346283
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTGCCA GAATCGGCCC TTATCGTGTG CTGAACCTGC TGTGCGAAAC CAAACTGTCA 
CGCCTCTACA AGGTGTTTGA TCAGCGGCAC AACCGCGTGG CAATCCTGAA GCTGGCCCTG 
GCCGACAACG CAAAAGAGGA AAGTGCCGCC CTGACCCTCA GAAAAGAGGC CGGCCTGCTT 
TCACGGCTCT CCCATCCCGG CATCATATCT CTGTACGATC ACGGTGAACA CGACCATCAG 
CCTTACCTGG TTGCCGAATT TGTGGAAGGC CACAGCCTGA TTATGGAACG GAGGGAAAGG 
CCGGATATGG GGCGTGTTCT CAGTGTCGTC ATGGCCGTTG CCCGGGCACT TGCCTATCTT 
CATCAGCACA ACATCCTGCA CCTTGACGTC AAACCGGAAA ACATCCTGAT CGATGGCCGG 
CGCACCCCGC CCATGCCCAA GCTGTGCGAC TTCGGCATGG CCCTGGTGAT TGAGAAAAAC 
GCGCCGCCGC CACCGCCCCA CCGGCGCATC GGCGGCACCG CTGTTTATAT GGCGCCGGAA 
CACGCCCTGG GCCGTGCACT GGATGGCAGA ACCGACCTCT ATTCCCTGGG GGTTGTCCTT 
TTTGAGCTGC TTACGGAAGA AAAGCCTTTT TACGGCATCA CACCCACGGC AACCGCGATT 
ATGCATGTTC AGGCACAACC GCCGCCACCA CGCCTGTATA ACCCGGAGAT TCCACCGGCC 
CTGGAGGCCA TTGTGTTAAA GGCAATAGCC AAGAATCCGG ACCACCGGTT TTCCGGCCTG 
GAACACTTTA TCGCCGCTCT TGCACCCATC GCGTCTCGCA TGCAGGCCCG CCCTCCTGAG 
CCCCCGGTCA TGGATGCCGG GACCCTGACC CGTGCCGATG CTGAGAAATT TCTTCGTGCA 
GGCAGGCCGG ATCGGGCCAT TGCCGTTTAC CGCGATATGC TTACGCGCAA CCCGGCGGAT 
TTTCAATGCC ACCACCGGTT GGGGGGCATC CTTTACCGGC AGGGCCGGTT TCAGGCGGCC 
ATTCGCCACC TTCAGGCCGC CATAGCCGTC AATAATCAAC AGGCCGAACT TCACAAGGAT 
CTGGGCAGGG CCCTGTCCCG CACCGGTCAG AATGAAAACG CCGTGGCCGC TTTTCAGAAG 
GCCCTTGCGC TGAATCCTGA TAATCTGTCG ATCCTTCTGG ATCTTGGCCG TCAGTACAAC 
CGGCAAAAAC AACCGGAGGC AGCGGAACCA TACTTTGCCC GGGCACTCGC CGCCCACCCC 
ACCTCACTGG CGGCCTATAA CGGGCTGGCC CATACCAAAC AGGTGCTCGG CAAAACAGCG 
GAGGCCATCA CCCTTTTTCA AAAAGCGCTC GCACTCGCGC CGGACCAGCC GGAACTGCAC 
TACAATCTGG GAACCGCCCA TCTGGCGATA CAGGAAACCG CGGCAGCCGA ATCCTGCTTT 
GCCGCGGCAC TCCGCCTGAA ACCCGGCTTT GCCGCCGCCC ACCATGCCAT GGGAAATATC 
TGTCTGGCGG CAAAAAATCC CGTTCAGGCA GCGGTCCACC TGAAGGCGGC CCTGGCCGCC 
GACGGCAGCG GCGTTAGCGC TTTATACGAC CTTGGCCGGG CCTGCAGAAT GCAGAACGAT 
CTTGATGGCG CGGTATCGGC CTTTGGCCGC TACCTGAAAT TTGCCGCCAA AGACACCACC 
GCCTACCTGG CCCTGGCCGA AGTGCTGGAG GCCCAGGGAA AACAGGAGGC AGCCGGAAAG 
TACCGCCGCA TGGCCGAAGA GCTGAACGCG CACTCATCTT CCGGCCAGAC CCATAAAACA 
GACCCATAA 

 

Protein sequence

MVARIGPYRV LNLLCETKLS RLYKVFDQRH NRVAILKLAL ADNAKEESAA LTLRKEAGLL 
SRLSHPGIIS LYDHGEHDHQ PYLVAEFVEG HSLIMERRER PDMGRVLSVV MAVARALAYL 
HQHNILHLDV KPENILIDGR RTPPMPKLCD FGMALVIEKN APPPPPHRRI GGTAVYMAPE 
HALGRALDGR TDLYSLGVVL FELLTEEKPF YGITPTATAI MHVQAQPPPP RLYNPEIPPA 
LEAIVLKAIA KNPDHRFSGL EHFIAALAPI ASRMQARPPE PPVMDAGTLT RADAEKFLRA 
GRPDRAIAVY RDMLTRNPAD FQCHHRLGGI LYRQGRFQAA IRHLQAAIAV NNQQAELHKD 
LGRALSRTGQ NENAVAAFQK ALALNPDNLS ILLDLGRQYN RQKQPEAAEP YFARALAAHP 
TSLAAYNGLA HTKQVLGKTA EAITLFQKAL ALAPDQPELH YNLGTAHLAI QETAAAESCF 
AAALRLKPGF AAAHHAMGNI CLAAKNPVQA AVHLKAALAA DGSGVSALYD LGRACRMQND 
LDGAVSAFGR YLKFAAKDTT AYLALAEVLE AQGKQEAAGK YRRMAEELNA HSSSGQTHKT 
DP