Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1519 |
Symbol | |
ID | 5694356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 1812018 |
End bp | 1813100 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641264114 |
Product | A/G-specific adenine glycosylase |
Protein accession | YP_001529400 |
Protein GI | 158521530 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1194] A/G-specific DNA glycosylase |
TIGRFAM ID | [TIGR00586] mutator mutT protein [TIGR01084] A/G-specific adenine glycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.570552 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACTGT TTTCCGCCGG GCCGTTCCAG CGCCGGCTGC TGCGCTGGTA TACGGCCCAT CAGCGGGACC TGCCGTGGCG AAGATCGAAA AACCCTTATC ACATCTGGGT TTCCGAGGTG ATGCTGCAAC AGACCCAGGT TGCCACGGTG GTTGATTACT ACCGGCGGTT TCTGCAGGCC TTTCCCGATA TCGGGACCCT GGCGGTCGCC GAGCTTCAGG ATGTTTTAAA GCTGTGGGAG GGTCTGGGCT ACTATGCCCG GGCAGCCAAC CTTCACAAGG CCGCGCGGCA AATCGTTGCC GGCGGTAAAA AGCGCGTTCC CCGCACCCCT GAAACCTTTG GCCGGCTGCC CGGCGTGGGG GACTATATTA ACGCGGCGGT CTCCAGCATC GCCTTCGGCC ATCCGCTGCC GGTGGTCGAC GGCAATGTCA AGCGGGTCCT GGCAAGGCTT TTTCTTTTGG ACGAGCCGGT CAACCGGCCC TCAAACCACA GGGTGTTTCT TGAAAAGGCC CGCCTGCTGC TGGCTTTCAA AGATCCCGGC ACCTTTAATC AGGCGATGAT GGAGCTGGGC GCCCTGGTGT GCAAACCGGG CCGGCCCCTG TGCGACCAAT GTCCTGTAGC ATCGTTCTGT GGGGCCCATC AGGCCGGGCG CGTCACCGAT TTCCCCAGGC GGCTGGCCGC CAGAAAAAAC CCTCACCATC ATCTGGCTGT GGGGCTGGTA AAAAAAGGAA ACCGGTTTCT TATTGTGCGT CGGCCGGCAA CCGGTCTTCT GGCCGGGCTG TGGGAGATGC CCGGGGGCCG AGTAGAAAAG CCTGAAAACC CGGCCGATGC CTGTTGCCGG GCCGTTCTGG AGAGCGTCGG TCTCACGGTT TTCCCCGGCC CGCGCCTTGC CCGGGTTGCC CATGCCTACA CCCATTTTAA AATCACCATG GACCTGTTTG CCTGCGACGT TGTCTCCGGC CGAGTAAAAA GAAACGGGTA CCAGGCCCAC CACTGGATCC GCATGAAAGA TATTGGCCAA TATCCTTTTC ACAGGGCCAT GCACAAGGCC TTTGCCGCAC TGGCGGGCGC CCTCCCTCCT TGA
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Protein sequence | MTLFSAGPFQ RRLLRWYTAH QRDLPWRRSK NPYHIWVSEV MLQQTQVATV VDYYRRFLQA FPDIGTLAVA ELQDVLKLWE GLGYYARAAN LHKAARQIVA GGKKRVPRTP ETFGRLPGVG DYINAAVSSI AFGHPLPVVD GNVKRVLARL FLLDEPVNRP SNHRVFLEKA RLLLAFKDPG TFNQAMMELG ALVCKPGRPL CDQCPVASFC GAHQAGRVTD FPRRLAARKN PHHHLAVGLV KKGNRFLIVR RPATGLLAGL WEMPGGRVEK PENPADACCR AVLESVGLTV FPGPRLARVA HAYTHFKITM DLFACDVVSG RVKRNGYQAH HWIRMKDIGQ YPFHRAMHKA FAALAGALPP
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