Gene Dole_1502 details

Gene Information

• Locus tag: Dole_1502
• Symbol: rnc
• ID: 5694339
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: -
• Start bp: 1793165
• End bp: 1793860
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 641264097
• Product: ribonuclease III
• Protein accession: YP_001529383
• Protein GI: 158521513
• COG category: [K] Transcription
• COG ID: [COG0571] dsRNA-specific ribonuclease
• TIGRFAM ID: [TIGR02191] ribonuclease III, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.00547993
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACACCA CACTGCTCGA ACAACACCTG GTGTACCGGT TCACCGACAC CGGCCTGCTG 
GCAAAGGCCC TTCGGCACAG CTCCTATGTG AATGAACAGG CCGACCCCGC CATGGAGGAC 
AACGAGCGCC TTGAATTTCT CGGAGACGCT GCCCTCTCCC TGTGCATCGG CCACCTGCTG 
ATGGCCCGGT TTCCCGAGCT CTCCGAGGGG GACCTCTCCC AGACACGGGC CGGTCTGGTC 
AATGCCGGCT GGCTGGCGGA TATCGGCCGT TCCATGAACC TGGGGGAATA TGTTCTGCTG 
GGCAAAGGAG AAGAGCAGAC CAATGGCCGG AACAAGGACT CCATTCTGGC CAACGCGGTT 
GAGGCACTGC TGGGCGCCAT TTATCTGGAC GGCGGTTTTG ACGCGGTGAT GGCCGTGGTG 
CGGCACAAGT TTGAAAACGA TATCGAGGCC CTGGCGGCCC TGGACATGAA CCGGAACTAC 
AAGAGCCTGC TTCAGGAGCT GACCCAGGCC ACTGACGGCA AGGCCCCGAC TTATGAAATC 
ATTGACGAAA CCGGGCCGGA CCACGACAAG ACCTTCCACT GCCGGGTTTC CGCCGGCGAC 
ATTCAGGCCG AAGGATCCGG GAAAAACAAA AAAACGGCCC AGCAGGATGC GGCCCACAAG 
GCCCTGGCCC TGATCAAAGG GGAACCCCTC CCATGA 

 

Protein sequence

MNTTLLEQHL VYRFTDTGLL AKALRHSSYV NEQADPAMED NERLEFLGDA ALSLCIGHLL 
MARFPELSEG DLSQTRAGLV NAGWLADIGR SMNLGEYVLL GKGEEQTNGR NKDSILANAV 
EALLGAIYLD GGFDAVMAVV RHKFENDIEA LAALDMNRNY KSLLQELTQA TDGKAPTYEI 
IDETGPDHDK TFHCRVSAGD IQAEGSGKNK KTAQQDAAHK ALALIKGEPL P