Gene Dole_1493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1493 
Symbol 
ID5694330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand+ 
Start bp1781835 
End bp1782224 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content54% 
IMG OID641264088 
Productputative 6-pyruvoyl tetrahydropterin synthase 
Protein accessionYP_001529374 
Protein GI158521504 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.222013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGAAC TGACAGTCAC CACCCACTTT GCCGCGGCCC ACCAGTTGAA AATGGTGGCC 
CATAAATGCG AAAACCTTCA CGGCCACAAC TGGAAGGTGG AGGTGTGCGT GGCCGGCAGC 
GAGTTGGACC ATGCCGGCCT GCTCATTGAC TTTGGCGAAC TCAAGCGCCA TGTGGCCACT 
GTGATTGACG GACTGGACCA CCGCTTTTTA AACGAGCTTG AGTACTTTAA AAACGGTAAT 
CCCTCTTCGG AACACATTGC CGTTTATATC GCCGATCAAC TGACCGGCAT GCTTAAAGAG 
ACGCGGGCAA AAATCTCCCG GGTCAAGGTG TGGGAGTCGG AGAATTCCTG CGCCACCTAT 
ATTCCCGATG CCCAGGGACA GCCGCTGTGA
 
Protein sequence
MFELTVTTHF AAAHQLKMVA HKCENLHGHN WKVEVCVAGS ELDHAGLLID FGELKRHVAT 
VIDGLDHRFL NELEYFKNGN PSSEHIAVYI ADQLTGMLKE TRAKISRVKV WESENSCATY 
IPDAQGQPL