Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1452 |
Symbol | |
ID | 5694289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 1731916 |
End bp | 1733343 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641264047 |
Product | major facilitator transporter |
Protein accession | YP_001529333 |
Protein GI | 158521463 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACTCA TACCGGCGCA TTCGTTTTGG ATAAAACGTA TGGAGTCCCT GCGAACATCA AAACGCGCCG TACTGATCGT GGCCGCGGTG ACCACCTTCA TGGGCCCTTT CATGGTCTCC GGCGTCAACA TCGTGCTGCC GGCCATGGGC ACTGATTTTG CCGCCGGTGC CGTTCTGCTG AGCTGGGTGG CCAATGCCTA CCTGCTCTCC ACCGCCGTGA TGCTGGTGCC GGCCGCCAAG ATCGCGGACA TGGCCGGGCG CAGAAAAATA TTCATTTACG GCATCGGCCT GTTTACTGCG GCTACCGTGC TGATTGCCTT TGCCCCGACG ATCTGGATGG TGATCGGGCT GCGAATGCTT CAGGGAGTGG GCGCGGCCAT GGTCTCCACC ACGGGCATCG CCATCGTGGC CGCCGTGTTT CCGGTATCGG AACGGGGCCG GGCCATCGGC ATCACCGTGG CCGCGGTCTA TATCGGGCTC TCCACCGGGC CTTTTGCCGC CGGGTATCTG TCGGCCCTGT GGGGCTGGCG CAGCCTGTTT CTGGTCACCT TTCCCATGGG CCTTCTTTCG GTCTATCTTG CCGCCACCAT GATCAGGGAT GAGTGGACCC CTGCCGCGGG CCAGCCCCTG GACATCATCG GCACGCTGCT CTATGGCCTC TGCCTGGTGC TGCTGATGGC TGGTCTCTCC GGCATGCCGG GAATAAAAGG GACAATGGCA CTGGTCGGAG CAATCGTATG TTTCTATCTG TTTATCCGCC AGGAGTTAAA AACCCCCTAC CCGGTGGTGG AGATCGCCCT GTTTCAGAAG AACCGGGGGT TTGCCTTTTC CAGCCTGGCG GCCCTGATCA ACTATGCCGC CACCTTTGCC GTGGCCTTTT ACCTGAGCCT CTACCTGCAG TATATCAAGG CCATGACACC CCAGACCGCC GGCCTTGTCC TAATCACCCA GCCGGTGGTC ATGGCCCTGT TTTCCCCTCT GGCCGGCCGG CTTTCGGATC GGTTTGAACC CGGCGCCATC GCCTCCCTGG GCATGTCCCT GTGCGCCACG GGCCTGCTGC TGCTGGCCCT CCTGAACGGC GGCTCCGGCA TTTCCTATAT CGTAGGCACC CTGCTCCTCC TGGGCCTGGG GTTTGCCCTG TTTTCCTCAC CCAACATGAA CGCCATCATG AGCAGCGTGG CGCCGGCCCA TTACGGCCTG GCCTCGGGCA CAGTGGCCAC CATGCGACTG ATCGGCCAGA TGCTGAGTAT GGCCATTGCC ACCCTCTTTT TCGCCCTGTT CATCGGTGAC GTCCAGATCA CGCCGGAAAC CCACACCGCT TTTTTACAGG CCATGCGGCT GGGCTTTGCC GTGTGCTGCG GCCTCTGCCT GATCGGCATC TACTTCTCCT GGAACCGAGG ATCGATTCGT GCCAATACCG ACTCCTGA
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Protein sequence | MELIPAHSFW IKRMESLRTS KRAVLIVAAV TTFMGPFMVS GVNIVLPAMG TDFAAGAVLL SWVANAYLLS TAVMLVPAAK IADMAGRRKI FIYGIGLFTA ATVLIAFAPT IWMVIGLRML QGVGAAMVST TGIAIVAAVF PVSERGRAIG ITVAAVYIGL STGPFAAGYL SALWGWRSLF LVTFPMGLLS VYLAATMIRD EWTPAAGQPL DIIGTLLYGL CLVLLMAGLS GMPGIKGTMA LVGAIVCFYL FIRQELKTPY PVVEIALFQK NRGFAFSSLA ALINYAATFA VAFYLSLYLQ YIKAMTPQTA GLVLITQPVV MALFSPLAGR LSDRFEPGAI ASLGMSLCAT GLLLLALLNG GSGISYIVGT LLLLGLGFAL FSSPNMNAIM SSVAPAHYGL ASGTVATMRL IGQMLSMAIA TLFFALFIGD VQITPETHTA FLQAMRLGFA VCCGLCLIGI YFSWNRGSIR ANTDS
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