Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1410 |
Symbol | |
ID | 5694245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 1677292 |
End bp | 1677705 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641264003 |
Product | hypothetical protein |
Protein accession | YP_001529291 |
Protein GI | 158521421 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000260045 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAT TTGAAAAAAA ACTTTTGGGC AACCAGGGCG GGTTTACCCT GATTGAAATC ATTGCCGTGC TCGTGATCCT GGGTATTCTG GCTGCTGTGG CCGTGCCCAA GTTCATGGAC CTGACCGATG ATGCCAATGA AAAGGCCTTT GAGGGCGCTG CGGCCGCGGC CTTTTCCAAC GCCACGCTTT CTTATTCTCG CTTTGTGCTG AGAAACGACG CGGCACCGAA CAATATTAAT AACACACCGG CATGGACTGA CGGAACCAAC AGCGTTACCA TTGAGGACGA GCTTGGGGAT TATACGATTG ACAGTATAAG TTATAACGGC TCAGCCACCC CTCCCGTGCT GAGAATAACT GTAGAGAAGA CGGAAACTTC TGTAACCTTC ACCAAATCCT TCAACCTGCC ATAA
|
Protein sequence | MKKFEKKLLG NQGGFTLIEI IAVLVILGIL AAVAVPKFMD LTDDANEKAF EGAAAAAFSN ATLSYSRFVL RNDAAPNNIN NTPAWTDGTN SVTIEDELGD YTIDSISYNG SATPPVLRIT VEKTETSVTF TKSFNLP
|
| |