| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1391 |
|---|
| Symbol | |
|---|
| ID | 5694226 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 1653023 |
|---|
| End bp | 1653916 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641263984 |
|---|
| Product | thiamine pyrophosphate binding domain-containing protein |
|---|
| Protein accession | YP_001529272 |
|---|
| Protein GI | 158521402 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.882375 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCA CAGTCAACTT ACTGGACCTC CCGGAAGAGG AACTGATGCA CCCGGGCAAC
CGGGCCTGCG CCGGTTGCGG CCTCTCCCAG ATATACCGCA TCGGTCTCAA GGCCCTGGGC
CGGGACACCA TCTTGGTGGT ACCCCCCAGC TGCCTTACCG TTATGCAGGG GCTCTACCCC
ATTGCCGCCA CCCAGCTTCC CTGCCTCAAC GTCACCTTTG CCTCAACCGC CGCGGCAGCC
ACCGGGGTCC GGGCCGCGCT GCGCGCTCTG GACCGGGACA AAACCACGGT GGTGGCCTGG
GCCGGCGACG GCGGCACCAG CGACATCGGC ATTCAGGCCC TGTCCGGCGC CTGCGAACGG
GGCGAAAACC TGATCTATAT CTGCTACGAC AACGAAGCCT ACATGAACAC CGGCATTCAG
CGCTCCGGCA CCACCCCGGC CGGCGCCGTA ACCACCACCA CACCCATTCA CGGCAAGCGC
CAGCAGCGCA AGGACGTAGC CTCCATTGTG GCGGCCCACG ACATTGCCTA CGTGGCCTCC
TGCTCCTCGG CTTATCCCCT GGACTTCTAC ACCAAGCTTG TCAAGGCCAA ATCCATGACC
GGCACCCGCT ATTTCCACGT TCACACCGCC TGCCCGCCGG GCTGGGGATT TGATCCCCGG
TACACGGTCA AGGTGGGAAA GCTGGCCGTG GAAACCGGCC TGTTCGAGCT CTACGAGTAC
GAAAACGGAA AAACAACCCT TACCGGCGCC ACCGCAAAAC TGGCCGGCAA ACAGCGCAAA
CCCGTGGATC TCTACTTCAA GGCCCAGTCC CGGTTCAAAA CCATGCCCGA CCGCCAGATC
AAAGCCGTGC AACTGGAAAT CGACCAGAGA TGGGCCAAAC GGGAAAATCA TTGA
|
|---|
| Protein sequence | MTSTVNLLDL PEEELMHPGN RACAGCGLSQ IYRIGLKALG RDTILVVPPS CLTVMQGLYP
IAATQLPCLN VTFASTAAAA TGVRAALRAL DRDKTTVVAW AGDGGTSDIG IQALSGACER
GENLIYICYD NEAYMNTGIQ RSGTTPAGAV TTTTPIHGKR QQRKDVASIV AAHDIAYVAS
CSSAYPLDFY TKLVKAKSMT GTRYFHVHTA CPPGWGFDPR YTVKVGKLAV ETGLFELYEY
ENGKTTLTGA TAKLAGKQRK PVDLYFKAQS RFKTMPDRQI KAVQLEIDQR WAKRENH
|
|---|
| |