| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1352 |
|---|
| Symbol | |
|---|
| ID | 5694186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 1609449 |
|---|
| End bp | 1609868 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641263944 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001529233 |
|---|
| Protein GI | 158521363 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00001959 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAATG TGCTTTTCGT GGATGATGAG GCCGGTTTTC TGGATATCAT TACCAAGCGA
ATGACAAAGC GGGGCGTGGC GTCCGTGGGC ATCGCCGACG GGGAAGAGGC CTTGTCGCTG
ATTGAAAAGC AGCCCTTTGA TGTGGTGGTG CTGGACGTCA GAATGCCGGG CTGCAGAAGC
GGCATCGAGA TTCTCAAGGA GATCAAGACC CGGTGGCCCC TGGTGGAGGT GATCATGCTG
ACCGGGCATG CCCTGCTGGA AGTGGCAAAA ACCGGAATGG AAAACGGCGC GTTTGATTAT
CTTGTCAAAC CGGCCGATTT TGATGAACTG TACTACAAGA TCAGAGATGC CGGCCAGAAG
AAAAAGCTGC AGGAAACAAA GATAAAGGGA ATTGACGATA TCATGAAGAA ACAGGTGTAA
|
|---|
| Protein sequence | MVNVLFVDDE AGFLDIITKR MTKRGVASVG IADGEEALSL IEKQPFDVVV LDVRMPGCRS
GIEILKEIKT RWPLVEVIML TGHALLEVAK TGMENGAFDY LVKPADFDEL YYKIRDAGQK
KKLQETKIKG IDDIMKKQV
|
|---|
| |