| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1266 |
|---|
| Symbol | |
|---|
| ID | 5694101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 1513445 |
|---|
| End bp | 1514026 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641263860 |
|---|
| Product | 2'-5' RNA ligase |
|---|
| Protein accession | YP_001529149 |
|---|
| Protein GI | 158521279 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1514] 2'-5' RNA ligase |
|---|
| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0332104 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAGCA AGCCTTCGAA AATACGATGT TTCATGGCCT TTGACCTGCC GGCGGAGGTG
ATTGATGATC TGGCCGGCAT TCAGAAAACA GTTGCGGCCG GCGGCGTGAA GATCGGCTGG
GTGGCGCCTC AAAATATTCA TCTTACAGTC AAATTTCTTG GCGAGATATC GCCGGAGGCG
GTTCAAAAAG CCCTGGCAGC TGCCGAACAG GCAGTTAAGG GCATTTCCCC CATGCAGATT
CGAGCTCAGG GCATCGGGGT GTTTCCGGAT ATGAACCGGC CCAGGGTGTT GTGGGCAGGG
CTTTCCGGGG ACCTGCGATC TCTTGTTGAC TTTCACGGCA TCCTGGATGA AAATCTGTTT
TCTGCCGGTT TTGGTAAGGA AAAGCGCCGG TTTACGGCCC ATGTGACGCT GGGTCGTATC
AAGCGTGCCG TGGATGTGCG GCAACTGGCC GCTGCCATGG CGCCCTGTCT TGATTTTCAA
TCAAAGCCCT TTTGCATCGA CAGGCTGATG GTGTATAAAA GCGATTTGAC CGCAGCCGGG
CCTGTTTACA GCCGGCTGGC GGCGTTTGCG TTGGGCGGGT AA
|
|---|
| Protein sequence | MESKPSKIRC FMAFDLPAEV IDDLAGIQKT VAAGGVKIGW VAPQNIHLTV KFLGEISPEA
VQKALAAAEQ AVKGISPMQI RAQGIGVFPD MNRPRVLWAG LSGDLRSLVD FHGILDENLF
SAGFGKEKRR FTAHVTLGRI KRAVDVRQLA AAMAPCLDFQ SKPFCIDRLM VYKSDLTAAG
PVYSRLAAFA LGG
|
|---|
| |