Gene Dole_1225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1225 
Symbol 
ID5694059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1462766 
End bp1463953 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content61% 
IMG OID641263818 
Productradical SAM domain-containing protein 
Protein accessionYP_001529108 
Protein GI158521238 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGGTA TATCAAAGCT TTACTGCGGC ACCACCGAAC CGTCTGACGC CCTCCGGTAC 
GGCCGGCGGT CGGAAGACCT GCCCTCCCAC CTGCTTCAGT TCTCCATTGA CAAGCGGCCG
GTGGTGGTCT GGAACATCAC CAAGCGGTGC AACCTCAAGT GTGTTCACTG TTACGCCCAT
GCCACGCCCC AGGCCCAGGA CAACGAGCTT TCAACAGACG AGGGCAAGGC CCTGATCGAC
GACCTGGCCG ATTTCAAGGC CCCGGTGCTG CTTTTTTCCG GCGGCGAGCC CCTGATGCGA
AAGGACCTGC CCGAACTGGC CGGATATGCC GTGAAAAAGG GCATGCGGGC CGTGATCTCC
ACCAACGGCA CCCTGATTCA TGAAGACACC GCCAGGGAAC TCAAGGACAT CGGCCTCTCC
TACGTGGGCA TCAGCCTGGA CGGGGGCCGG GCCATCAACG ACCGGTTTCG CGGCGTGCAC
GGCGCCTATG ACGCGGCCTT AAAGGGCATC GACAACTGCC AGAAGGCGGG CATCAAGGTG
GGCCTGCGCT TTACCATCAA CAAGTTCAAC GTGGGCGAAG TGCCGCTGCT GTTTGACATT
CTTGAAGAGC GCAGTATTCC CCGCATCTGT TTCTACCACC TGGTTTACGC GGGCCGGGGG
TCGTTGCTGG TAAAGGATGA CCTTTCCCAT GCCGAGACCC GCAAGGTGGT GGACCTGATC
ATTGACCGGA CCAAAGACCT TCACGACCGC AACCTGCCCA AGGAGGTCCT CACCGTGGAC
AACCACGCCG ACGGCCCCTA CCTCTACCTG CGCCTGCTCA AGGAGGACCC GGACCGGGCC
GCCCAGGTGC TGGAACTGCT CCAGATGAAC GATGGCAACA ACTCGGGCCG GGGCATCGGC
TGCGTGAGCT GGGACGGCGA GGTCCATGCC GACCAGTTCT GGCGCCACCA CAGCTTCGGC
AACGTGCGCA AGCGGCCTTT TTCTGAAATC TGGACCGACA CTTCCGAACC CCTTATGGCC
AGACTTAAAG AAAAGAAAAA ACACGTCACC GGCCGGTGCG CGGCCTGCAA ATGGCTCGAC
ATCTGCGGCG GCAACTTCCG GGTGCGGGCC GAAGCGACCA CCGACGACCT CTGGGCCCCG
GACCCGGCCT GCTATCTCAC TGACGAAGAA ATCGGCATTA CACCCTAA
 
Protein sequence
MIGISKLYCG TTEPSDALRY GRRSEDLPSH LLQFSIDKRP VVVWNITKRC NLKCVHCYAH 
ATPQAQDNEL STDEGKALID DLADFKAPVL LFSGGEPLMR KDLPELAGYA VKKGMRAVIS
TNGTLIHEDT ARELKDIGLS YVGISLDGGR AINDRFRGVH GAYDAALKGI DNCQKAGIKV
GLRFTINKFN VGEVPLLFDI LEERSIPRIC FYHLVYAGRG SLLVKDDLSH AETRKVVDLI
IDRTKDLHDR NLPKEVLTVD NHADGPYLYL RLLKEDPDRA AQVLELLQMN DGNNSGRGIG
CVSWDGEVHA DQFWRHHSFG NVRKRPFSEI WTDTSEPLMA RLKEKKKHVT GRCAACKWLD
ICGGNFRVRA EATTDDLWAP DPACYLTDEE IGITP