Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1216 |
Symbol | |
ID | 5694050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 1450143 |
End bp | 1451282 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641263809 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001529099 |
Protein GI | 158521229 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.152303 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATACGC CATACACAGA AGGGCCGATC AAAAGGCCCC TTGCCAAACG GACCCTGCGG GCCATTCTCG GCTACGGAGT GCCCGCGCTG GTCATTGTTC TGCTGATTGT TATTTTCATG GCACGGAAAG CGGGGGTGGA TACCCGGCGC CAGGCCGAAC TGGGGCAGGA CCAGGCCGCA GTGAACGTGG TGACTTACAC GGTGGCCCCC CGCGACATTT CCGACCGCAT CAACCTGCCC GGCACCCTGT CGGCCTGGGT CAACCTCAAC GTGGTGTCCC AGGTGGCGGG CGAGGTGCTT GAAAAAAACG CCCGTGACGG GGCCGTGGTG AAAAAGAACG AAAAGCTGGC GGTCATTGAT TCGCGCAAAT ATAAGAACGC CTATGACGCG GCCAACGCAT CCCTGGAGTC GGCCCTTGCC ACGCAGCAGC GCCTGACCGA GCTTTACAGG GAACAGCTGG CCAGCAAGTC GGACCTGGAC GCGGCCAATG CCGCGGTGGA GAACTACCGG GCCGCCATGG AAACCGCCGC CCTGGACCTG GACCGGTGTG TTATCCGGGC GCCCATTGCC GGCATTATCA ACCGGGTGTT TATTGAAAAG GGCCAGGTGC TGGCCCCCGG CCAGGAAGTG GCCGAAATTC TGCAGATCGA CCCGGTAAAG GTCACCGTGG GCATTCCCGA GTCCGACGTG CCGTCAGTGC GCGGGCTTGA AGAATTTACC GTGACCATTG CGGCCCTGGG CGGCCAGACC TTTTCCGGGA AAAAACACTT TCTGTCCAAA ACCGCCGACC CCATGGCCCG GCTCTATGAC CTGGAAATCC TGGTGAAAAA CCCGGATGCC CGCATTCTGC CGGACATGTT CGCCCGGGTG AACGTGGTCA AGAAAACCGT TGAAAACGCA GTGGTGATAC CCCTTTACGC GGTGACATCC AACGCCGTTC ATACCGTTAT GGTGGAAAAA GAGGGGATGG TCCACCGCCG TGAAGTGACC CTGGGCATCA CGGAGGGATT TAACGTGGAG ATCTCCTCCG GCCTTGCCTT CGGCGAGCAG GTAGTGGTGA TGGGCCAGAA GCAGGTGGCC GACGGCCAGC CCGTCAATGT CACGCGAACC GTTACCGATC CTGAGGCGGC AATGCAATGA
|
Protein sequence | MNTPYTEGPI KRPLAKRTLR AILGYGVPAL VIVLLIVIFM ARKAGVDTRR QAELGQDQAA VNVVTYTVAP RDISDRINLP GTLSAWVNLN VVSQVAGEVL EKNARDGAVV KKNEKLAVID SRKYKNAYDA ANASLESALA TQQRLTELYR EQLASKSDLD AANAAVENYR AAMETAALDL DRCVIRAPIA GIINRVFIEK GQVLAPGQEV AEILQIDPVK VTVGIPESDV PSVRGLEEFT VTIAALGGQT FSGKKHFLSK TADPMARLYD LEILVKNPDA RILPDMFARV NVVKKTVENA VVIPLYAVTS NAVHTVMVEK EGMVHRREVT LGITEGFNVE ISSGLAFGEQ VVVMGQKQVA DGQPVNVTRT VTDPEAAMQ
|
| |