| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1186 |
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| Symbol | |
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| ID | 5694020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 1413010 |
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| End bp | 1416603 |
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| Gene Length | 3594 bp |
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| Protein Length | 1197 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641263779 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001529069 |
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| Protein GI | 158521199 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATTA CCGAAACTGC AAATGCTTTT CTCTATAATC GTCTGGTAAC AATTGCCAAA
AGCGGTAATG CGGAAGCCTT GCAATCACTT CTGGCGGGTA CAGGGTTACC TGCCTTGGCA
CGGGATGACG AACCTGCGGA ACAAATTTTC AATGCTTTGG AATCTGGAGA CTATGGTAAT
CTTGCGCGCC GGATTACCCG TCTGCTTGCA AAATTGCTCC ATCAGCGAGC GGAGTCATTG
GAACGCAGCC TTGCCGCAAT GGGGGGTGCA GCCATAGGCG GGCGCAATGC GCAGATGGTT
TCAAGCCCGT ATCTGGAAGA CGAAACTTAT GTTTATAATT TATTCCTTCT ATCTTCCAGG
CTACCGCGTG ACGAAGCACT ATTTGGTGGT TTGAGGCGTT TTTTCGATAT TGGTTTTACA
CGTGGCGTGA TCATTACCAC CACGGGCAAC AGGGCAGGTT TTCAACTTCG GCGTGCACTG
GCGGAGCAGC AGACAGACCT CAGCCTGCGA GACTATTTTC AGGATTTGCT CGAAGATAAA
AAACGCCCGT GGAATCCAGG CAGGCGAACC GAGTTGCTGG AGGCATGGCG TGGGCTACTC
GGCTCACTTA ATTTTGACAA AGATCGTGAT GATACCTTGC GAACCATCGA CAGGGGTTTG
CGCGCAATTC ATGATACTGT GGAGCCTCAT CCTGAAAGTA TTGACCTTCT TACACTGGCA
CTGTGGCATC TGGATAACAG CTTCCCGCTG GATTCACCGA CCTGGGTCAG TTATCTGGAA
AGCTACTGGG CCGACTGGCC GGAATTGTTG CGCGACATCG CCGCTGAAAC CTGGCCGGGG
TTGGACCCCC AGCCGCTTGA TGAACTTCCT TCGTTACCGG AAGACATGGT GAAGGTCTGG
GATGCGTTTG GCGATGAAGA ACAGGCAAAT TTTCGTGACA TTATCAGGCG CAATGCTGCG
GAGGAGGGGC AAAGTTTTAT CAATCAGCTC CTTTTTAAGC CTTTTGTCGT TAGTGATCTG
CCGCTCCAAG AGGTGCGTAA TTTGCTGATG CGGCTGGCGG ACCATTTTTG GCCGAAGAAG
GAAAGCCCTA AAATCAACAC GCCTGATGAA CCCGAGCAAA GGCTGGATAT CAATAGCCAG
CAGTCAAAGC GAAGAGTATC GATGGACCGG CTTTCCAGAA TGGAAGCGGT CAACCGGACT
TTGACTGAGA TTGAGCGCCA TCTGGCGGAA GGGCATGAAT CAATTGCCCG TCGTTTTGTT
GAGGAGTTGA TAGAACAGCA GCGTAAAGCT GTTGTGGCGG ATAGCTATCA ACATACCGCC
AAGACGCTCT CTAAAGCAGC GACTATAGCC CAGCGTTACG GCTTGCTGGA ATGGGCGGAA
AACTTGCTTC GGGAGGCGTG TGAGGAAAAT CCTAACGACG AAGTATCGGC CAATGGCCTG
GCGGATGTGC TGAAAGCACG CGGGGAACTG GAGGCTGCGG AGCAACAATA TCGCCAGAAC
ACCGCCCGCT GGCCTAACGA CGAAGTATCG GCCTGTGGCC TGGCGGATGT GCTGAAAGTA
CGCGGGGAAC TGGAGGCTGC GGAGCAACAA TATCGCCAGA ACACCGCCCG CTGGCCTAAC
GACGAAGTAT CGGCCTGTGG CCTGGCGGAT GTGCTGAAAG CACGCGGGGA ACTGGAGGCT
GCGGAGCAAC AATATCGCCA GAACACCGCC CGCTGGCCTA ACGACGAAGT ATCGGCCTGT
GGCCTGGCGG ATGTGCTGAA AGCACGCGGG GAACTGGAGG CTGCGGAGCA ACAATATCGC
CAGAACACCG CCCGCTGGCC GAACGACGAA GTATCGGCCT GTGGCCTGGC GGATGTGCTG
AAAGCACGCG GGGAACTGGA GGCTGCGGAG CAACAATATC GCCAGAACAC CGCCCGCTGG
CCGAACAACG AAGTATCGGC CTGTGGCCTG GCGGATGTGC TGAAAGCACG CGGGGAACTG
GAGGCTGCGG AGCAACAATA TCGCCAGAAC ACCGCCCGCT GGCCTAACGA CGAAGTATCG
GCCTGTGGCC TGGCGGATGT GCTGAAAGCA CGCGGGGAAC TGGAGGCTGC GGAGCAACAA
TATCGCCAGA ACACCGCCCG CTGGCCGAAC GACGAAGTAT CGGCCTGTGG CCTGGCGGAT
GTGCTGAAAG CACGCGGGGA ACTGGAGGCT GCGGAGCAAC AATATCGCCA GAACACCGCC
CGCTGGCCGA ACAACGAAGT ATCGGCCTGT GGCCTGGCGG ATGTGCTGAA AGCACGCGGG
GAACTGGAGG CTGCGGAGCA ACAATATCGC CAGAACACCG CCCGCTGGCC TAACGACGAA
GTATCGGCCA ATGGCCTGGC GGATGTGCTG AAAGCACGCG GGGAACTGGA GGCTGCGGAG
CAACAATATC GCCAGAACAC CGCCCGCTGG CCTAACGACG AAGTATCGGC CAATGGCCTG
GCGGATGTGC TGAAAGCACG CGGGGAACTG GAGGCTGCGG AGCAACAATA TCGCCAGAAC
ACCGCCCGCT GGCCTAACGA CGAAGTATCG GCCAATGGCC TGGCGGATGT GCTGAAAGCA
CGCGGGGAAC TGGAGGCTGC GGAGCAACAA TATCGCCAGA ACACCGCCCG CTGGCCTAAC
GACGAAGTAT CGGCCAATGG CCTGGCGGAT GTGCTGAAAG CACGCGGGGA ACTGGAGGCT
GCGGAGCAAC AATATCGCCA GAACACCGCC CGCTGGCCTA ACAACGAAGT ATCGGCCTGT
GGCCTGGCGG ATGTGCTGAA AGCACGCGGG GAACTGGAGG CTGCGGAGCA ACAATATCGC
CAGAACACCG CCCGCTGGCC TAACGACGAA GTATCAGCCA ATGGCCTGGC GGATGTGCTG
AAAGCACGCG GGGAACTGGA GGCTGCGGAG CAACAATATC GCCAGAACAC CGCCCGCTGG
CCTAACGACG AAGTATCGGC CAATGGCCTG GCGGATGTGC TGAAAGCACG CGGGGAACTG
GAGGCTGCGG AGCAACAATA TCGCCAGAAC ACCGCCCGCT GGCCTAATAG TCATTTTGTT
GTAAACGGAC TGGCTAATGT ATTGAGAAAG TTGAAACGTC ACCCCGAGGC TTTGAGTCTG
TTGTCGTCAT GCCAGTCTCC AGATTGCCAC GATTTACATT TGCGTGCGAT GATTTTGCTG
GATTTGGGTA GGATAGAAGA TGCGCGCATA TCTCTCATTG AAGGGCAGCA TTTGGCTATC
ACCCCAGTTC AGAAAGAATA TTTTCAGCGC GGTTTGGCGC TGCTGGAAAT TCGAGCGCGT
CAGTATGACT CCGCCAGAGA GATATTAGCC AGATTACCCG GAAATGTCAT TCCCCTTGAT
TTGTTCCGAC TTCACACAGA AGTGGCGCAA GGAGAAACCG CCAAGGCAAG CGAGTTATTG
CATTCGTTGG AGGCACGCAG ATCGCGCATG AATTTCAATG AATGCAAGGT GTTCGAACTG
GTGCGGCAAG GTTTTGGTCT AAACGTCAGC AGCCACGGAC ATCAGCCGAA TGAAAGTGAA
TTGGAAAAAA TTTTTGACGC CGAAATGGAA CTCCAATTAG CGGTTAATTT TTGA
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| Protein sequence | MNITETANAF LYNRLVTIAK SGNAEALQSL LAGTGLPALA RDDEPAEQIF NALESGDYGN
LARRITRLLA KLLHQRAESL ERSLAAMGGA AIGGRNAQMV SSPYLEDETY VYNLFLLSSR
LPRDEALFGG LRRFFDIGFT RGVIITTTGN RAGFQLRRAL AEQQTDLSLR DYFQDLLEDK
KRPWNPGRRT ELLEAWRGLL GSLNFDKDRD DTLRTIDRGL RAIHDTVEPH PESIDLLTLA
LWHLDNSFPL DSPTWVSYLE SYWADWPELL RDIAAETWPG LDPQPLDELP SLPEDMVKVW
DAFGDEEQAN FRDIIRRNAA EEGQSFINQL LFKPFVVSDL PLQEVRNLLM RLADHFWPKK
ESPKINTPDE PEQRLDINSQ QSKRRVSMDR LSRMEAVNRT LTEIERHLAE GHESIARRFV
EELIEQQRKA VVADSYQHTA KTLSKAATIA QRYGLLEWAE NLLREACEEN PNDEVSANGL
ADVLKARGEL EAAEQQYRQN TARWPNDEVS ACGLADVLKV RGELEAAEQQ YRQNTARWPN
DEVSACGLAD VLKARGELEA AEQQYRQNTA RWPNDEVSAC GLADVLKARG ELEAAEQQYR
QNTARWPNDE VSACGLADVL KARGELEAAE QQYRQNTARW PNNEVSACGL ADVLKARGEL
EAAEQQYRQN TARWPNDEVS ACGLADVLKA RGELEAAEQQ YRQNTARWPN DEVSACGLAD
VLKARGELEA AEQQYRQNTA RWPNNEVSAC GLADVLKARG ELEAAEQQYR QNTARWPNDE
VSANGLADVL KARGELEAAE QQYRQNTARW PNDEVSANGL ADVLKARGEL EAAEQQYRQN
TARWPNDEVS ANGLADVLKA RGELEAAEQQ YRQNTARWPN DEVSANGLAD VLKARGELEA
AEQQYRQNTA RWPNNEVSAC GLADVLKARG ELEAAEQQYR QNTARWPNDE VSANGLADVL
KARGELEAAE QQYRQNTARW PNDEVSANGL ADVLKARGEL EAAEQQYRQN TARWPNSHFV
VNGLANVLRK LKRHPEALSL LSSCQSPDCH DLHLRAMILL DLGRIEDARI SLIEGQHLAI
TPVQKEYFQR GLALLEIRAR QYDSAREILA RLPGNVIPLD LFRLHTEVAQ GETAKASELL
HSLEARRSRM NFNECKVFEL VRQGFGLNVS SHGHQPNESE LEKIFDAEME LQLAVNF
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