Gene Dole_1161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1161 
Symbol 
ID5693995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand- 
Start bp1386682 
End bp1387293 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content59% 
IMG OID641263754 
Productheterodisulfide reductase subunit C-like protein 
Protein accessionYP_001529044 
Protein GI158521174 
COG category[C] Energy production and conversion 
COG ID[COG1150] Heterodisulfide reductase, subunit C 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.860285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGTAT CCGCCATTGA GGTAGCACCG GAAGTGGCCT CCCCCCTGAT CACTGAAGTC 
ATGGAACGTT CCGGGCAGAA CCTGCTTGCC TGCTACCAGT GCCGTCGCTG CGCCGGGGCC 
TGTTCGGTGG GCGACGAGAC GGACTTTTTT ACCCCGGACC GTCTGATCCG CGCCATTCTT 
CTCGGGGACC GCCAGACCGT GCTGAACAAC GAACTGATCT GGAAATGCGT CTCCTGCTAC 
ACCTGCGGTA TTCGTTGCCC CAACGGCATT CAGACCGGCC GCATCACCGA GACCCTGAAA 
AAGATGGCCA AGGAGGCCCA CCTGGCATCC CCCCATCCCA GGGTGGTCCA TTTCCACGAC 
GCCTTTGTCG GGTCCGGCGT GCGGTGGGGC CGGGTCAACG AGACCGAGTT CATGGCCGTC 
TACGAGATGA AGAACACCGC CGCCGACATA AAGAAAATGG ACTTTGCCGC CGTTATCGCC 
GAAGTGACCC GGCAGTTGAA GCTGGCCGTG GCCATGTTTC GACTGGGCCG CATGCACTTC 
GGTTTTCTGT CGGCAAAAGG ACGCGGTGAA ATAAAACAAC TTCACAAGAA AGCGAAAACC 
ACCACGCACT GA
 
Protein sequence
MTVSAIEVAP EVASPLITEV MERSGQNLLA CYQCRRCAGA CSVGDETDFF TPDRLIRAIL 
LGDRQTVLNN ELIWKCVSCY TCGIRCPNGI QTGRITETLK KMAKEAHLAS PHPRVVHFHD 
AFVGSGVRWG RVNETEFMAV YEMKNTAADI KKMDFAAVIA EVTRQLKLAV AMFRLGRMHF 
GFLSAKGRGE IKQLHKKAKT TTH