| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1090 |
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| Symbol | |
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| ID | 5693924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 1290213 |
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| End bp | 1292753 |
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| Gene Length | 2541 bp |
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| Protein Length | 846 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641263684 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_001528974 |
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| Protein GI | 158521104 |
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| COG category | [K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.874134 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGAAA TTAGCGCCCA GCCCCGGATC GTCTATATTG ATGACGACAG AAACCAGTTG
GCGCTGGTAG AACGTTTTTT GTCGGGCCCA TTCGAAGTGA TCACCGCGGA AAACGGGGAA
GATGGCTTGC GGATCATCAG CGAGACGCCG CCCGACCTGG TCCTGCTGGA CATCAACATG
CCGAAAATGG ACGGGTATGA AGTGTGCACC CGATTACAGG CGACCCCAAA AACCTCTTTC
ATTCCGGTGG TTTTTCTCAC CGCCATGGAA GAAGAGAAAG ACCGTGCCCG TGCGTTTGCG
GCAGGCGCCT CTGATTTTCT GGTCAAACCC GTCAAAAAGG ATGCGTTGCT CGAGAAAGTG
CGCGCGCAAC TGGCCACGGG TGCTGCATGG AAAGACCTTC AGGCAGACAA CCGGCAATGG
CATAAAAAAA TAGAATCAGC GGATTTTGCC GGTTTCAAGG AACATGTTGC CGGCCAACTG
AACCTGGCAC CGGATAAAAA AGAGCGGCTT TTCGAAACAA CCGCAGCGGA TATCTATACC
GTCTTTGCTG AGATGGGGCT TGTCGAAAGT ACCCTGAGCC GGCTCATGTC ACAGTATATG
GGCCTGCCTT ACACCACACG CATCTCCCCC GAGACGATCC GGCTGGGCGC CATACCAACG
GCCTTCTGCA AAGCCAATCA TGTGCTGCCG GTTATGACCG AATCCGGGGA AAAGGGGTTT
ATCCTCAGCA ACCCCTTTAA TCTGGACCTG GTCGATATGC TGAAAAAAAA TTTCGCCCTT
GAGAAGACCG CGGCTATCAG TATTGCCGAA CCGAGCCGGA TCGATCTTTT CTTTATTGAG
GCCCCTTCTC AACAGAAATC ATCGGCTGTT GGCGGCCCAC AAACACCATC ACCGGCCACA
GCTCCGAAAA TAACGGTTCG GAACGAGGCC GACACCGACC ATCCGATCGT GCAGATCACC
GATACCATAC TGAACGCGGC CGTGGCGGAG AGAGCCAGCG ACATTCATAT CGAGCCCAAA
GAGACGGAAA CGACCGTACG GTTCCGCGTC GACGGGGACC TGCGGCATGC ATTCACGCTG
AAGAAGGCCA CCGGCATGAT GATCATTTCC AGGCTGAAAG CCCAGAGCGG AATCGATATC
GCGGAAAAAC GAAAACCCCA GGACGGCGGC TTTGTTGCCA ACCTGGGCGA CCGGGTATTT
AACTTCCGGC TCTCCACCAC CTCCACGCCC AACGGGGAAA GCCTTGTCAT GCGGTTGCTC
GAACCCTATG GCGCGGCCAA CAGCCTTTCG GAACTCGGTA TGATGGACGG GCAGGTTGCG
GCCATGGTCG CGGCCGCCAA TCGCTCCAGC GGAACAATTC TGATCGTGGG ATCGACCGGC
TCCGGGAAGA CGACCACCAT TTACAGCCTT CTTCATGCCA TCGACCACAA GAAGCGCAGC
ATCATGTCCG TGGAAGATCC GGTCGAGTAT CGCATTCCCT TTCTCAACCA GCAGCAGGTG
AACGAAAAGG CCGGGGTCAC CTTCGATTCC CTGCTCAAGG CGGCGGTCCG GCAGGATCCG
GATGTCCTGT TCATGGGAGA GATTCGAGAC GGGTTTTCCG CCAAAATGGC CGTCGACTTT
GCCAGCACCG GCCACCTGAC CATCACCACG CTGCACACAT CCAACGCCAC CACCGCCCTG
TTCCGCCTTC ACCGTCTGGG TATCGACCGG GGCACCATGG CCGATACCAT TATCGTGATC
GTGGCGCAAA AACTATTGAA AAAACTCTGT CCCCACTGCA AGCAGACGGT TCCGATTTCG
CCCCAGGAGA GAGAGATGCT GGCGGCCTTC ACGGACGACG TTCCCTCTGT TGTAGCTCGG
TCTGTGGGCT GTCCCGAGTG CCGCAGCACC GGCTATCTCG GCAGGGAAGG CGTTTACGAG
GTACTGGAAT TCGATACCCA GATCGCCGAA ATGGTCCGTT CCAACGCGCC CATCGCCGAA
ATCCGTTCCT TTGCGAAACG CCGGGGGGAC CTTCTGATTG ATACGCACGC CATCACCAAG
GTCAAAGAGC TTCTTTTCAC CCCCAAGGAT ATTTTTGAAA AAGTGCTGGC GGAAGAAACG
CCCGTCCGTG AACGGCAGAA GCCGCGCAAA CCCGAACCGG CAACCGCTGA TGCCGGTCCC
CCGGCTTCCG CCGCATCCGT TCTGCTGGTT GAAGACGACG CGGATACCCG CATGCTCATC
ACCCGCTTTC TGGAAACTGA CGGTTACACG GTCACCGCCT GCGCCGACGG CATAGACGCA
TTGCTGTGTC TCGGAAAACA GTCCTTTGAC CTGATTCTCT CTGATATCGA CATGCCCAAT
CTCGACGGGT TCAAGCTGCT CGAAATGATC AACCAGAAGG GCGTCAGCGT GCCGGTCATC
TTTCTGACCT CCAGAGCCGG CCATGAGGAC GAAACCAGAG GGCTGGAGCT GGGGGCCGTC
GACTATATAA AAAAACCGGT GCAAAAAGAC CTGCTTCGGT TAAGAGTCAA AAAAACGATC
CAGGGAAGGG TGTCGCCATG A
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| Protein sequence | MNEISAQPRI VYIDDDRNQL ALVERFLSGP FEVITAENGE DGLRIISETP PDLVLLDINM
PKMDGYEVCT RLQATPKTSF IPVVFLTAME EEKDRARAFA AGASDFLVKP VKKDALLEKV
RAQLATGAAW KDLQADNRQW HKKIESADFA GFKEHVAGQL NLAPDKKERL FETTAADIYT
VFAEMGLVES TLSRLMSQYM GLPYTTRISP ETIRLGAIPT AFCKANHVLP VMTESGEKGF
ILSNPFNLDL VDMLKKNFAL EKTAAISIAE PSRIDLFFIE APSQQKSSAV GGPQTPSPAT
APKITVRNEA DTDHPIVQIT DTILNAAVAE RASDIHIEPK ETETTVRFRV DGDLRHAFTL
KKATGMMIIS RLKAQSGIDI AEKRKPQDGG FVANLGDRVF NFRLSTTSTP NGESLVMRLL
EPYGAANSLS ELGMMDGQVA AMVAAANRSS GTILIVGSTG SGKTTTIYSL LHAIDHKKRS
IMSVEDPVEY RIPFLNQQQV NEKAGVTFDS LLKAAVRQDP DVLFMGEIRD GFSAKMAVDF
ASTGHLTITT LHTSNATTAL FRLHRLGIDR GTMADTIIVI VAQKLLKKLC PHCKQTVPIS
PQEREMLAAF TDDVPSVVAR SVGCPECRST GYLGREGVYE VLEFDTQIAE MVRSNAPIAE
IRSFAKRRGD LLIDTHAITK VKELLFTPKD IFEKVLAEET PVRERQKPRK PEPATADAGP
PASAASVLLV EDDADTRMLI TRFLETDGYT VTACADGIDA LLCLGKQSFD LILSDIDMPN
LDGFKLLEMI NQKGVSVPVI FLTSRAGHED ETRGLELGAV DYIKKPVQKD LLRLRVKKTI
QGRVSP
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