| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1035 |
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| Symbol | |
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| ID | 5693870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 1219928 |
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| End bp | 1220641 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641263632 |
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| Product | hypothetical protein |
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| Protein accession | YP_001528922 |
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| Protein GI | 158521052 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGGCT TTCCTCCGAA TAGACGGTCC GGAAGACTCT TCCTGGTGGC AACCCAGGGG
GCCGGGGGGT TTACCCTTTT TGAACTCCTG GTGGCCATTG CCGTGTTTGC CCTGCTGACC
ACGGCCATGT ACGGGGGGCT CAACAGCCTG CTGGGCAATG CCGAGTCCCT TAGCCGGAGC
GCCGTTGCCT ATGACTCGGC CCGTTCCTGC CTGGACCGGA TGGCCCGGGA TCTCCGGTCG
GTCTATGTGG CGGTGCCGCC GGCCTATGAG ACACCGGGGT TTGATACCGA CCCGGATCCC
TACCGGTTTG TCGCCAACGG TATCGGTCAG GATGTGCGGA TGCGGTTTGT CGCCTTTTCC
CATGTGCCGC TGGACAGGGG GCTGACGGCT GAGGCGGGGC GTATCGTTTA TTATCTGTAC
ACCCCCGAAG GGCGTGACAC CCGCGTGCTG ATGCGAAACG ACCGGGTGCT TCAATATGAC
GCGGACACGG AAGAGGGACA AGACCCCATC GTATGTGAAA ACATCGCTTC CCTGGATCTG
CTGTTTTATG ACGGGAACGG ACGGGAGTAT GACCGCTGGG ATTCAGACTC CAGTGAGTTT
GATTATGCCA CGCCGCGGGC CGTGGGGATT CAGCTGGTGC TGGATGCTGA CGGGCGGCGC
TATCCTTTTG AAACCATAGT GGACCTGCCG GTCTACCGGG AGCCGGTGGA ATGA
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| Protein sequence | MTGFPPNRRS GRLFLVATQG AGGFTLFELL VAIAVFALLT TAMYGGLNSL LGNAESLSRS
AVAYDSARSC LDRMARDLRS VYVAVPPAYE TPGFDTDPDP YRFVANGIGQ DVRMRFVAFS
HVPLDRGLTA EAGRIVYYLY TPEGRDTRVL MRNDRVLQYD ADTEEGQDPI VCENIASLDL
LFYDGNGREY DRWDSDSSEF DYATPRAVGI QLVLDADGRR YPFETIVDLP VYREPVE
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